Pairwise Alignments

Query, 1031 a.a., FIG00732904: hypothetical protein from Variovorax sp. SCN45

Subject, 456 a.a., UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase from Pseudomonas simiae WCS417

 Score =  100 bits (250), Expect = 2e-25
 Identities = 96/332 (28%), Positives = 142/332 (42%), Gaps = 17/332 (5%)

Query: 651 DKRVPVLKVQNVLQSVLLLGDHARCEFTGRVCGVLGSGAGSGTVTAMLAGALTVWGEVAQ 710
           D  +P L V +   ++  LG   R  FT  V  + GS +G  TV  +LAG L   G V  
Sbjct: 74  DSTLPQLLVADTRLALGQLGALNRAAFTNPVAAITGS-SGKTTVKELLAGVLRTRGPVHA 132

Query: 711 PEGNISLPSGIAWN-MTCMPRHAAYWVMEMGASHMPASA---QLVRPSLVVVTGLSAASQ 766
             GN++   G     +   P H A  V+E+GAS +   A    L +P +VV+     A  
Sbjct: 133 TRGNLNNDFGAPLTLLELAPEHTAA-VIELGASRVGEIAYTVALTKPHVVVINNAGTAHV 191

Query: 767 KHRGPSEAAARLDSRIFQSMSPGDSVVLNRDMPEFATF-AEAAMTQQLQIVTYGEHKDAD 825
              G  E        I + +      VLN D   F T+   AA  + L         D  
Sbjct: 192 GEFGGPEKIVEAKGEILEGLDASGIAVLNLDDKAFETWRVRAAGRKVLTFAVLNAAADFH 251

Query: 826 VRLLAFDHGEVQALVAGEP---FQLRLNAPGRHMGASAIAALAALQALRLPLAAAVEPFA 882
              +  D     +     P     ++LN  G H  A+A+AA AA  AL + L        
Sbjct: 252 ASNITVDARGCPSFTLHTPQGNEHVQLNLLGNHNVANALAAAAAAYALGVSLFGIATGLG 311

Query: 883 HFEPPGGRGALHTIHIGGGSFKLIDETYDANPSSMRAALEMLSQAPCEPARRVAILGDMQ 942
             +P  GR       +     ++ID+TY+AN SS+ AA+++L        R+V +LGD+ 
Sbjct: 312 AVQPVKGR---TVAQLATNGMRVIDDTYNANQSSICAAIDLLKSF---EGRKVLVLGDIA 365

Query: 943 ELGPAAQRHHLDLEAELLASQPDRVLLCGPLM 974
           ELG  A++ H ++ A   A + D +   GP M
Sbjct: 366 ELGDWAEQSHREVGA-YAAGKVDALYAVGPNM 396