Pairwise Alignments

Query, 1031 a.a., FIG00732904: hypothetical protein from Variovorax sp. SCN45

Subject, 468 a.a., UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase from Acinetobacter radioresistens SK82

 Score = 82.8 bits (203), Expect = 5e-20
 Identities = 109/415 (26%), Positives = 175/415 (42%), Gaps = 46/415 (11%)

Query: 576 WTASEMARVTGGEWVVR--PEDGWRASGVTQRSFMRKGRVVFDHQTRPSKVPLAAVTLKG 633
           WTA ++   T G W     PE   +             R++ D  +R ++   A + LKG
Sbjct: 14  WTAQQLMEATQGYWYQERCPEQPIK-------------RILTD--SRQAEAGDAFLALKG 58

Query: 634 -----------VLQPAAAVLCTDPKPHLDKRVPVLKVQNVLQSVLLLGDHARCEFTGRVC 682
                      VL     V   + +P LD  +  L V +  Q++  LG + R +      
Sbjct: 59  ERFDAHDFVAQVLDKGCQVAIVE-RP-LDLDMMQLVVTDTRQALGRLGAYRRQQNPQLKV 116

Query: 683 GVLGSGAGSGTVTAMLAGALTVWGEVAQPEGNISLPSGIAWNMTCMPRHAAYWVMEMGAS 742
             L   +G  T   ML   L+         GN++   G+   +  +     Y VME+GAS
Sbjct: 117 IALTGSSGKTTTKEMLGSILSRLAPTLVTRGNLNNDLGVPMMLLELTAEHQYAVMELGAS 176

Query: 743 H---MPASAQLVRPSLVVVTGLSAASQKHRGPSEAAARLDSRIFQSMS-PGDSVVLNRDM 798
           H   +  ++QLV+P +  +  +  A     G  E   R  S I+  ++  G SV+   D 
Sbjct: 177 HQGEIDYTSQLVQPQVAGIINVGTAHLGEFGGREGICRAKSEIYAHIAKDGTSVIPAAD- 235

Query: 799 PEFATFAEAAMTQQLQIVTYGEHKDADVRLLAFDHGEVQALVAGEPFQLRLNAP--GRHM 856
            +F T A     Q  +++++GE  D     +       Q ++        +N P  G H 
Sbjct: 236 -DF-TDAIRHAVQTTRVLSFGEGGDIYATEMTLLAQSAQFMLHTPQGVREVNLPFAGLHN 293

Query: 857 GASAIAALAALQALRLPLAAAVEPFAHFEPPGGRGALHTIHIGGGSFKLIDETYDANPSS 916
             +A AA A   A+ + L   V      +  G +G L+   I       ID+TY+ANP+S
Sbjct: 294 VQNATAATAFALAIGISLDDIVIGLELAQ--GAKGRLN--FISHKQHLFIDDTYNANPTS 349

Query: 917 MRAALEMLSQAPCEPARRVAILGDMQELGPAAQRHHLDLEAELLASQPDRVLLCG 971
           MRAA E+L+Q   +   +V + GD+ ELG AA   H  L  +L++   + V+  G
Sbjct: 350 MRAAGEVLAQ---QSGIKVMVTGDIGELGDAAAVEHYRLGRDLVSQDINFVVTIG 401