Pairwise Alignments

Query, 333 a.a., Pca operon transcriptional activator PcaQ from Variovorax sp. SCN45

Subject, 309 a.a., Transcriptional regulator, LysR family from Variovorax sp. SCN45

 Score =  110 bits (274), Expect = 6e-29
 Identities = 85/283 (30%), Positives = 131/283 (46%), Gaps = 5/283 (1%)

Query: 14  NVQLRHLRCLVAVAQERHLARAAERLALSQPAVSKTLSELEAIVGTRLVERSKAGRRGVQ 73
           +V+ R L  L  +   RHL RAAE + +SQPA +K L +LE  +G RL ER   G     
Sbjct: 13  HVRPRQLLLLARLDTHRHLGRAAEAMNISQPAATKLLQQLEDSLGERLFERLARGMEP-- 70

Query: 74  GLTAAGEQLLAHALRVLEALDASAQAVAPAAGGRIERLRIGALPSVAPALLPQALARLRD 133
             TA G+ L+ +A RVL     + + +     G    LR+G++P   P LL  AL     
Sbjct: 71  --TAYGQILIRYAHRVLSDFGTAREEMLALRSGLSGALRVGSVPGAVPELLAPALVEYHR 128

Query: 134 GWPQVQIVVKSAANAALLDELRAGELDLVVGRMSDPRLMGGLSFELLHTEPLVFAVRAGH 193
             PQV + V    +  +  +L  G++DLV+GR++D       +   L  E  V  VRAGH
Sbjct: 129 RHPQVAVSVVVETSDVIQAQLEQGDVDLVLGRLTDGHDEAKYASVPLLGESQVVVVRAGH 188

Query: 194 PLALKA-ASVQAVLGYPLVVYGEGTIPRHNTESFLSARGLVLPTNALQTLDVAVARALVA 252
           P+  +A  ++  +  +  V+   G+  R   E+ +   G+    + ++T       AL+ 
Sbjct: 189 PVFERANLTLAEMADWSWVLQPPGSPQRGRFEAAMREAGIRTRLDIIETASPIAITALLE 248

Query: 253 VSDAVWITPLGAARGELADGRLVQLRIETAGTEEPVGLLQRSD 295
            SD   + P   A      G L  + IE      P+ L+ R D
Sbjct: 249 NSDMAAVMPASQASHYARLGVLRTVPIELPVRVPPICLITRED 291