Pairwise Alignments

Query, 333 a.a., Pca operon transcriptional activator PcaQ from Variovorax sp. SCN45

Subject, 320 a.a., hypothetical protein from Variovorax sp. SCN45

 Score =  131 bits (330), Expect = 2e-35
 Identities = 93/276 (33%), Positives = 147/276 (53%), Gaps = 7/276 (2%)

Query: 18  RHLRCLVAVAQERHLARAAERLALSQPAVSKTLSELEAIVGTRLVERSKAGRRGVQGLTA 77
           RH + LVA+   R + + A  + ++ PAVSKTL+ELE  +G +L ERS    RGV   TA
Sbjct: 15  RHFQLLVALDDYRQIGKVAALMNVTTPAVSKTLTELEEGLGMKLFERSV---RGVTP-TA 70

Query: 78  AGEQLLAHALRVLEALDASAQAVAPAAGGRIERLRIGALPSVAPALLPQALARLRDGWPQ 137
            GE ++  A  ++  L      +   + G   ++RIG LPS A +LLP +L +L+   P 
Sbjct: 71  FGECMIRGAKMMMRGLAEVGDELHALSHGVTGKIRIGVLPSSAISLLPASLLKLKKLSPA 130

Query: 138 VQIVVKSAANAALLDELRAGELDLVVGRMSDPRLMGGLSFELLHTEPLVFAVRAGHPLAL 197
              +V+ A    LL E+R+G ++L++G +   +    +  E+L  +     VR+GHPLAL
Sbjct: 131 TPAIVREATMDVLLHEMRSGSIELILGTLPVRKADTDVDEEVLFEDQTTVVVRSGHPLAL 190

Query: 198 KAASVQAVLG-YPLVVYGEGTIPRHNTESFLSARGLVLPTNALQTLDVAVARALVAVSDA 256
           + +     L  YP ++  EG++ R     +    GL  P N ++TL ++  R+ +A SDA
Sbjct: 191 RESLDWIDLSPYPWILPPEGSLLREPLSQWFRDSGLPEPPNVIETLSLSFIRSYLAHSDA 250

Query: 257 VWITPLGAARGELADGRLVQ-LRIETAGTEEPVGLL 291
           +   P   ++ ELA  R V+ L +       PVGLL
Sbjct: 251 IATMPASTSK-ELAKSRFVEVLPLPLPSLVRPVGLL 285