Pairwise Alignments

Query, 333 a.a., Pca operon transcriptional activator PcaQ from Variovorax sp. SCN45

Subject, 307 a.a., Transcriptional regulator, LysR family from Pseudomonas putida KT2440

 Score =  101 bits (251), Expect = 3e-26
 Identities = 93/309 (30%), Positives = 141/309 (45%), Gaps = 10/309 (3%)

Query: 15  VQLRHLRCLVAVAQERHLARAAERLALSQPAVSKTLSELEAIVGTRLVERSKAGRRGVQG 74
           +  R LR  VAV +E H+ RAAERL+LSQPA+S+ + +LE  +   L ERS   +R +  
Sbjct: 1   MDFRQLRYFVAVYEEGHVGRAAERLSLSQPALSQQIRQLEHSLDLSLFERS--NKRLLP- 57

Query: 75  LTAAGEQLLAHALRVLEALDASAQAVAPAAGGRIERLRIGALPSVAPALLPQALARLRDG 134
            T A   L  HAL +L+ L  + +A+    G  +  L IG L +V P+L+PQ L RLR  
Sbjct: 58  -TLAAHTLYNHALPLLDGLQRAHEAMRNFKGQSLRTLAIGVLQTVRPSLIPQLLERLRKA 116

Query: 135 WPQVQIVVKSAANAALLDELRAGELDLVVGRMSDPRLMGGLSFELLHTEPLVFAVRAGHP 194
            P + + +   +   +   L  G LD+ +  +  P    GL   LL+ + L   +   HP
Sbjct: 117 QPHLVVQIYELSGLEIERRLLNGNLDIGISYL--PPRQPGLHGLLLYEDELQLVIPDTHP 174

Query: 195 LA-LKAASVQAVLGYPLVVYGEGTIPRHNTESFLSARGLVLPTNALQTLDVAVARALVAV 253
           L   K  S++     P+++ GE    R   ++ L+++G      A       +  +L   
Sbjct: 175 LKDFKKVSIRQAAELPMLMLGEEFQIRQIWQAQLASQGRRPQVQAEMNNMAGILDSLAHT 234

Query: 254 SDAVWITPLGAARGELADGRLVQLRIETAGTEEPVGLLQRSDAEPSALRAAMAVLLREA- 312
           + A  I P  A      D  L+   +        VGL+ R      A    +  LL E  
Sbjct: 235 ALAT-ILPGRAKEAAEDDQGLLWKPLSEPRVPLKVGLVFRDAQRQQASVELLRTLLEEET 293

Query: 313 -AREQGAVP 320
            AR  GA P
Sbjct: 294 DARLMGASP 302