Pairwise Alignments

Query, 612 a.a., GTP-binding protein TypA/BipA from Variovorax sp. SCN45

Subject, 606 a.a., ribosome associated GTPase from Pseudomonas putida KT2440

 Score =  688 bits (1775), Expect = 0.0
 Identities = 351/605 (58%), Positives = 447/605 (73%), Gaps = 6/605 (0%)

Query: 4   KQIRNIAIIAHVDHGKTTMVDQLLRQSGTFADHEKVVDTVMDNNAIEKERGITILAKNCA 63
           + +RNIAIIAHVDHGKTT+VD+LLRQSGT   +E   + VMD+N  EKERGITILAKN A
Sbjct: 3   ENLRNIAIIAHVDHGKTTLVDKLLRQSGTLERNELNDERVMDSNDQEKERGITILAKNTA 62

Query: 64  VTWQGTHINIVDTPGHADFGGEVERALSMVDGVVLLIDAQEGPMPQTRFVTKKALALGLK 123
           + W G HINIVDTPGHADFGGEVER +SMVD V+LL+DAQ+GPMPQTRFVTKKA   GLK
Sbjct: 63  INWNGYHINIVDTPGHADFGGEVERVMSMVDSVLLLVDAQDGPMPQTRFVTKKAFEAGLK 122

Query: 124 PILVVNKVDKPGANPDKVVNAAFDLFDKLGATDEQLDFPVVYASGINGWSSLEEGAPGEQ 183
           PI+V+NKVD+PGA PD V++  FDLFD LGATDEQLDF VVYAS +NG + L+  A  E 
Sbjct: 123 PIVVINKVDRPGARPDWVLDQIFDLFDNLGATDEQLDFKVVYASALNGIAGLDHTAMAE- 181

Query: 184 WGPDMSALFDTILKHVPSQKGDPAAPLQLQISALDFSTFVGRIGVGRISQGTLKPMTDVV 243
              DM+ L+ +I+ +VP+   D   P Q+QISALD+++F+G IGVGRI++G +KP T VV
Sbjct: 182 ---DMTPLYQSIVDNVPAPSVDRDGPFQMQISALDYNSFLGVIGVGRIARGRVKPNTPVV 238

Query: 244 VMEGPDGKSIKGRVNQVLTFQGLDRVQATEAGPGEIVLINGIADIGIGVTITDPANPAPL 303
            ++  +GK   GR+ +++   GL RV   EA  G+IV I+G  ++ I  T+  P     +
Sbjct: 239 AID-TNGKKRNGRILKLMGHHGLHRVDVEEAQAGDIVCISGFDELFISDTLCAPDAVEAM 297

Query: 304 PMLKVDEPTLTMNFCVNTSPLAGREGKFVTSRQIWDRLQKELQHNVALRVNETDEEGIFE 363
             L VDEPT++M F VN SP  G+EGKFVTSR I DRL KEL +NVALRV ETD    F+
Sbjct: 298 KPLTVDEPTVSMTFQVNDSPFCGKEGKFVTSRNIKDRLDKELLYNVALRVQETDSPDKFK 357

Query: 364 VMGRGELHLTILLENMRREGYEMAVSKPRVVFRTVNGEKHEPIELVTADIEDQHQGGVMQ 423
           V GRGELHL++L+E MRREG+EMAV +P V+ R V+G K EP E VT DI ++ QG VM+
Sbjct: 358 VSGRGELHLSVLIETMRREGFEMAVGRPEVIIREVDGVKQEPFENVTIDIPEESQGKVME 417

Query: 424 ALGERKGELVNMEPDGRGRVRLEYRIPARGLIGFTNEFLNLTRGSGLISNIFDSYEPHK- 482
            +G RKG+L NM PDG+GRVRLEY IPARGLIGF N+FL LT G+G++++IFD Y+  K 
Sbjct: 418 EMGLRKGDLTNMVPDGKGRVRLEYNIPARGLIGFRNQFLTLTNGAGILTSIFDRYDTMKS 477

Query: 483 GDIGGRKNGVLISMDDGEIFTYALGKLDDRGRMFVRANDPVYEGMIVGIHSRDNDLVVNA 542
           G + GR NGVL+S++ G+  TY+L  L  RG++FV     +Y G I+G++SRDNDL VN 
Sbjct: 478 GQMSGRLNGVLVSVETGKALTYSLETLQARGKLFVEHGQEIYNGQIIGLNSRDNDLGVNP 537

Query: 543 TRTKQLTNFRVSGKEDAIKITPPIELTLEYGVEFIEDDELVEITPKSVRLRKRFLKEHER 602
           T+ K+L N R SGK++ I + PP+  TLE  +EFI+DDEL E+TPKS+RLRK+ L E ER
Sbjct: 538 TKGKKLDNMRASGKDEVIALVPPVRHTLEQALEFIQDDELCEVTPKSIRLRKKILDEGER 597

Query: 603 KRAGR 607
            RA +
Sbjct: 598 TRAAK 602