Pairwise Alignments

Query, 284 a.a., ATPase associated with various cellular activities, AAA_5 from Variovorax sp. SCN45

Subject, 278 a.a., ATP-dependent Clp protease ATP-binding subunit ClpA from Alteromonas macleodii MIT1002

 Score =  426 bits (1095), Expect = e-124
 Identities = 210/281 (74%), Positives = 244/281 (86%), Gaps = 4/281 (1%)

Query: 1   MKFQGSDNYVATQDLMLAVNAAITLKRPLLVKGEPGTGKTMLAEEVAQSLGLPLLQWHIK 60
           M F G+ NY+AT+DL LAVNAAITL+RPLL+KGEPGTGKTMLAEE+A+SLG  L+QWHIK
Sbjct: 1   MAFSGTSNYIATKDLQLAVNAAITLERPLLIKGEPGTGKTMLAEELAESLGTELIQWHIK 60

Query: 61  STTKAQQGLYEYDAVSRLRDSQLKDLDGGERVSDINNYIVKGVLWQAFTADQPVALLIDE 120
           STTKAQQGLYEYDAVSRLRDSQL    G +RV DI+NYIVKG LW+AF+A++   LLIDE
Sbjct: 61  STTKAQQGLYEYDAVSRLRDSQL----GDDRVHDISNYIVKGKLWEAFSAEKRPVLLIDE 116

Query: 121 IDKADIEFPNDLLREIDRMEFYCYETRELIRAKHRPVVFITSNNEKELPDAFLRRCFFHY 180
           IDKADIEFPNDLL E+D+MEF+ YET+E + AK RP+V ITSNNEKELPDAFLRRCFFHY
Sbjct: 117 IDKADIEFPNDLLLELDKMEFFVYETQERVVAKQRPIVIITSNNEKELPDAFLRRCFFHY 176

Query: 181 IKFPDAETMKHIVAVHFPGLKQELLTAAMKTFYDVRNLPGLKKKPSTSELLDWLKLLVAE 240
           I+FP+ E M+ IV VHFP LK++LL  A+K F+++R++PGLKKKPSTSEL+DWLKLLVAE
Sbjct: 177 IQFPNPEEMQEIVNVHFPDLKKKLLDEALKAFFEIRDVPGLKKKPSTSELIDWLKLLVAE 236

Query: 241 DIPLEALQSKDDKVAVPPLVGALLKNEQDVTLFEKLVFMQR 281
           DIP EAL SKD K A+PPL GALLKNEQD+ LFEKLVFM R
Sbjct: 237 DIPPEALHSKDGKAAIPPLYGALLKNEQDIHLFEKLVFMAR 277