Pairwise Alignments

Query, 645 a.a., Outer membrane component of TAM transport system from Variovorax sp. SCN45

Subject, 574 a.a., surface antigen (D15):Surface antigen variable number from Pseudomonas syringae pv. syringae B728a ΔmexB

 Score =  159 bits (401), Expect = 4e-43
 Identities = 138/550 (25%), Positives = 231/550 (42%), Gaps = 29/550 (5%)

Query: 98  ELDDLGATEISRLMVAAEANARELLGTLGYFTPTLTLELNETPQGAKAPREIVITVSPGE 157
           +L +  A  +    + AE  A +    LGY+   +  E+ +  Q +     +VI + PGE
Sbjct: 46  DLGERDAQALRNFSLGAEQQAEKAAQALGYYQAQIDSEIKDGDQPS-----LVINIQPGE 100

Query: 158 LTKVSNVQISYGGPIADDATAEAQRDSIRTAWALRAGQPFTQQAWDEAKTTALRSLTAKR 217
              + NV I   GP A     +A R  + ++ AL+ G       +++AK       +   
Sbjct: 101 PIHLRNVVIRVEGPAA---AMKAFR--VPSSDALKTGAVLNHGNYEDAKRLIQNQASRYG 155

Query: 218 FPTGNIEISRAEVDADRHEARLSVTYQSGPAYKFGPLVLRGIQRYDPDGARRIARLPSGQ 277
           F +G+    R  +D     A + + Y+SGP Y  G ++  G   +D D  +R+       
Sbjct: 156 FFSGHFTRQRLAIDPRAGVADIELVYESGPRYTLGKVMFSGDAPFDDDLLKRMVPFKENT 215

Query: 278 DYDQQKLLDAQQRLASSGYYDSVFLTLDTESGNPLAAPVIAQLREAPLQKVVLGAGFTTD 337
            YD Q + +  Q +  SGY++ V +     +      PV  QL     + + LG G++TD
Sbjct: 216 PYDSQLIAELTQAMQGSGYFEGVRVDAAPTAAENQVIPVTVQLETRKPRTMGLGLGYSTD 275

Query: 338 NGPRLSVDHIHNQVPLLG--WRAVSRLSVDRDIKSLSTELNAIPDDHGWRWFSGAELKSE 395
            GPR   +   +     G  +   S +S  R    L  ++   P       ++G     E
Sbjct: 276 VGPRGKANWTRHWANPQGHSYGFESEISAPRQNIGLWYDVPLDPPLTDKLRYAGGYQYEE 335

Query: 396 QSGSYVVDSGRLRGGR--NKSSDHIDRSYFLQYDYAQNRGTNAPPSASAVTANWGWTGRY 453
            +G+  +      G    +K     +R   L++   + R  +    ++ +     ++   
Sbjct: 336 IAGTDSLSKLLTAGPEWHSKLPSGWERVISLKWQREEYRLGDDAGLSTLLMPGISYSYLR 395

Query: 454 FDNNSAPSRGFGIALEVAAGYTLTGMQTPFTRTYARWLGVLPLGSSDDKETNARRSRLQL 513
            DN   P +G+ +  +        GM +     +A    VL  G +    T A+  R   
Sbjct: 396 SDNRIDPHQGYRLQFDTQVAKE--GMLSDANLVHAN---VLLKGLT----TVAQNHRFLG 446

Query: 514 RLEGGAVAAKDSAQIPSTLMFLTGGDTTVRGYSYKQIGTVRPDGTTVAGRYLGVASVEWQ 573
           R++ G         IP +L F  GGD +VRGY Y+++     DG  + GRY+   SVE+Q
Sbjct: 447 RVQFGGNLTDGYTSIPPSLRFFAGGDQSVRGYDYQKLSPTNSDGDRIGGRYMFAGSVEYQ 506

Query: 574 RPVVYNNKLTDWESVVFVDAGAVADKPAELKPKVGVGVGARWRSPVGPVQADLAYGVDSK 633
             +        W    F+D G   +   +   K GVG G RW SPVGP++ DLA+ +D  
Sbjct: 507 YSIA-----DKWRLATFIDQGNSFNSLDKPDLKTGVGFGVRWVSPVGPLRLDLAHALDDD 561

Query: 634 -RFRLHFRLG 642
              RLHF +G
Sbjct: 562 GGIRLHFSMG 571