Pairwise Alignments

Query, 645 a.a., Outer membrane component of TAM transport system from Variovorax sp. SCN45

Subject, 574 a.a., outer membrane protein assembly factor from Dickeya dianthicola ME23

 Score =  139 bits (351), Expect = 3e-37
 Identities = 138/554 (24%), Positives = 208/554 (37%), Gaps = 56/554 (10%)

Query: 109 RLMVAAEANARELLGTLGYFTPTLTLELNETPQGAKAPREIVITVSPGELTKVSNVQISY 168
           R     +   R+ L  LGY+ P +  E    P   +    + +TV PGE  K++   I+ 
Sbjct: 52  RFRTRVDEAVRKGLRALGYYDPEIRFEF--IPAQGRGRPVLKVTVKPGEPVKIAGASIAI 109

Query: 169 GGPIADDATAEAQRDSIRTAWALRAGQPFTQQAWDEAKTTALRSLTAKRFPTGNIEISRA 228
            G    D   +      R A     G+     A+D+ K         K +  G    S+ 
Sbjct: 110 RGGAQSDEDYQKLVRQHRPA----VGRVLNHGAYDDFKNELNTLSMRKGYFDGRFNKSQL 165

Query: 229 EVDADRHEARLSVTYQSGPAYKFGPLVLRGIQRYDPDGARRIARLPSGQDYDQQKLLDAQ 288
            V    H+A   + Y SG  Y+FG +  RG Q       R +     G  Y  ++L +  
Sbjct: 166 GVMPSTHQAWWDIDYDSGTRYRFGKVNFRGSQ-IQTAYLRNLVPFQEGDVYSAEQLGEFN 224

Query: 289 QRLASSGYYDSVFLTLDTESGNP-LAAPVIAQLREAPLQKVVLGAGFTTDNGPRLSVDHI 347
           +RL+++G+++S  +  D   G      P+ A L       V  G G+ TD GPRL     
Sbjct: 225 RRLSATGWFNSAVVAPDFGPGRRNKVLPLDAVLTPRTHNNVETGGGYATDVGPRLKTTWK 284

Query: 348 HNQVPLLGWRAVSRLSVDRDIKSLSTE----LNAIPDDHGWR---WFSGAELKSEQSGSY 400
              V   G    S LS+    + L       L   P +  +     F   +L   QS S 
Sbjct: 285 RPWVNAYGHSLESSLSLSTPEQQLDLSYKIPLLKSPLEQYYLVQGGFKREDLNDTQSDST 344

Query: 401 VVDSGRL----RGGRNKSSDHIDRSYFLQYDYAQNR-------GTNAPPSASAVTANWGW 449
             +  R      G +   + H    +F Q +              N       +  +WG 
Sbjct: 345 SFNLARYWELSSGWQRAVNLHWTLDHFTQANVTNTTMLIYPGLSFNRTRQRGGLMPDWGD 404

Query: 450 TGRYFDNNSAPSRGFGIALEVAAGYTLTGMQTPFTRTYARWLGVLPLGSSDDKETNARRS 509
           T RY                V    TL G    F    A+ + +          T A + 
Sbjct: 405 TQRY---------------SVDVSNTLWGSDIDFAVFQAQNVWI---------RTLAEKH 440

Query: 510 RLQLRLEGGAVAAKDSAQIPSTLMFLTGGDTTVRGYSYKQIGTVRPDGTTVAGRYLGVAS 569
           R   R   G +     +++P +L F  GGD ++RGY YK +     DG       L   S
Sbjct: 441 RFVARANLGWIETSSFSRVPPSLRFFAGGDRSIRGYKYKSVSPRDSDGKLTGASKLTAGS 500

Query: 570 VEWQRPVVYNNKLTDWESVVFVDAGAVADKPAELKPKVGVGVGARWRSPVGPVQADLAYG 629
           +E+Q      N    W   VFVD+G   +  A    K G G+G RW SPVGP++ D+A  
Sbjct: 501 LEYQY-----NVTGKWWGAVFVDSGEAVNDLARTNLKTGAGIGVRWASPVGPIKLDIARP 555

Query: 630 V-DSKRFRLHFRLG 642
           + D+ +  L F +G
Sbjct: 556 IGDNDKHGLQFYIG 569