Pairwise Alignments

Query, 645 a.a., Outer membrane component of TAM transport system from Variovorax sp. SCN45

Subject, 641 a.a., hypothetical protein from Agrobacterium fabrum C58

 Score = 91.7 bits (226), Expect = 9e-23
 Identities = 122/520 (23%), Positives = 200/520 (38%), Gaps = 46/520 (8%)

Query: 146 PREIVITVSPGELTKVSNVQISYGGPIADDATAEAQRDSIRTAWALRAGQPFTQQAWDEA 205
           P  +VITV+PG    + NV++        D T     +     + L AG      A   A
Sbjct: 148 PVPMVITVTPGPKFTLGNVRLE------GDVTGRNLDE-----YGLIAGGDAGSLAIIRA 196

Query: 206 KTTALRSLTAKRFPTGNIEISRAEVDADRHEARLSVTYQSGPAYKFGPLVLRGIQRYDPD 265
               +  L A+  P   +    A  +   +   +++  + GP    G + + G +  D D
Sbjct: 197 GNKLIDDLKAEGRPLAKLTKREAVANHATNTVDITMAAEGGPVAPLGAVTVTGEKTVDGD 256

Query: 266 GARRIARLPSGQDYDQQKLLDAQQRLASSGYYDSVFLTLDTESGNPLAAPVIAQLREAPL 325
             RR +RL  G+ Y  +KL  A  RL   G + S+ +            P+  ++ E   
Sbjct: 257 FIRRYSRLNGGEPYSPEKLRKAADRLRQLGVFSSLTIKEAGTLARDGTIPLTIEVSEGKH 316

Query: 326 QKVVLGAGFTTDNGPRLSVDHIHNQV-----PLLGWRAVSRLSVDRDIKSLSTELNAIPD 380
           +   +GA ++T  G  L     H  +      L    +VSR++    ++ +         
Sbjct: 317 RYFGVGAQYSTTEGIGLQGYWGHRNLFGQAESLRIEGSVSRIAEASSVEGMDYSAGITFT 376

Query: 381 DHGW-----RWFSGAELKSEQSGSYVVDS-GRLRGGRNKSSDHIDRSYFLQYDYAQNRGT 434
             G       + +    K+E   +Y   +     G   + +D    +  L+  +A     
Sbjct: 377 KPGMFNPRTTFKTSLIAKTENPDTYRAKTLTGTAGFAYELNDTDTAAAGLEVQWADTEDA 436

Query: 435 NAPPSASAVTANWGWTGRYFDNNSAPSRGFGIALEVAAGY-TLTGMQTPFTRTYARWLGV 493
                    +    +     D+   P+ GF  +L     Y  L G  T F+       G 
Sbjct: 437 FGKNEYLTTSIPLEFVRDTRDDKLNPTEGFRASLAAKPSYEALNG--TFFSSFEGSITGY 494

Query: 494 LPLGSSDDKETNARRSRLQLRLEGGA-VAAKDSAQIPSTLMFLTGGDTTVRGYSYKQIGT 552
             LG+ D       R  +  +L GG  V   D   IP+T  F  GG  +VRGYSY++I  
Sbjct: 495 KGLGAED-------RLIMAGKLSGGVLVGGSDLQDIPTTRRFFAGGGGSVRGYSYQEISP 547

Query: 553 VRPDGTTVAGRYLGVASVEWQRPVVYNNKLTDWESVV-FVDAGAVAD--KPAELKPKVGV 609
               G    GR   V SVE         K+TD   +V F DAG V+D   P     + G 
Sbjct: 548 YNAAGDATGGRSYVVGSVE------ARIKVTDTIGLVPFFDAGVVSDGVTPDFSDIRAGA 601

Query: 610 GVGARWRSPVGPVQADLAYGVD----SKRFRLHFRLGFTF 645
           G+G R+ +P GP++ D+A  ++       F ++  +G +F
Sbjct: 602 GIGLRYATPFGPLRLDVAMPLEKYDGGNNFGIYAGIGQSF 641