Pairwise Alignments
Query, 596 a.a., ABC transporter, permease protein 2 (cluster 4, leucine/isoleucine/valine/benzoate) / ABC transporter, ATP-binding protein 1 (cluster 4, leucine/isoleucine/valine/benzoate) from Variovorax sp. SCN45
Subject, 291 a.a., High-affinity branched-chain amino acid transport ATP-binding protein BraF from Pseudomonas putida KT2440
Score = 203 bits (517), Expect = 7e-57
Identities = 112/284 (39%), Positives = 169/284 (59%), Gaps = 31/284 (10%)
Query: 334 LLVVQGVTKSYGGVKPAQDVSFRLQRGHIHALIGPNGAGKSTMINMLTGVIEPDAG---- 389
+L V + +GG+K DVS +++R I ALIGPNGAGK+T+ N LTG + G
Sbjct: 6 ILSVDNLMMQFGGIKALSDVSLKVRRNQIFALIGPNGAGKTTVFNCLTGFYKASGGRIEL 65
Query: 390 --------VIRFLGQNIVG----QPA--------------HTICCLGMGRTFQNLRLFAD 423
VI+ LG+ PA H + G+ RTFQN+RLF +
Sbjct: 66 NVRGSHTNVIQLLGERFQAADFVSPARFANRMYYKMFGGTHLVNRAGLARTFQNIRLFKE 125
Query: 424 LSVLDNVMLGRHSRMSNGFLSSLVAWPTAGKQERATRERALQLLDLVDLGHLAHWPAGSL 483
+SV++N+++ +H ++ L+ ++ K E + A L++VDL A+ AG L
Sbjct: 126 MSVVENLLVAQHMWVNRNLLAGVLNTKAYRKAESDALDHAFYWLEVVDLVDCANRLAGEL 185
Query: 484 PYGLQRRVELARALATEPQLLLLDEPAAGLNPQETAELGELLLRI-GKCGVSILMVEHHM 542
YG QRR+E+ARA+ T P+++ LDEPAAGLNPQET L ++ + + ++++++EH M
Sbjct: 186 SYGQQRRLEIARAMCTRPKIICLDEPAAGLNPQETEALSRMIRVLRDEHDITVVLIEHDM 245
Query: 543 DLVMSISDHVIVLDYGIKIAEGKPAEVQANPRVVEAYLGVDDEE 586
+VMSISDH++VLD+G IAEG P +++ NP V+ AYLG D+EE
Sbjct: 246 GMVMSISDHIVVLDHGNVIAEGAPQDIRHNPTVIAAYLGADEEE 289