Pairwise Alignments

Query, 307 a.a., High-affinity branched-chain amino acid transport system permease protein LivH (TC 3.A.1.4.1) from Variovorax sp. SCN45

Subject, 290 a.a., High-affinity branched-chain amino acid transport system permease protein LivH from Xanthobacter sp. DMC5

 Score =  180 bits (457), Expect = 3e-50
 Identities = 108/303 (35%), Positives = 169/303 (55%), Gaps = 18/303 (5%)

Query: 6   LQALISGLAVGGAYALVALGFSITFTTTKTLNFSHGEFVSAGAFIGMSALFLVLGKPFDS 65
           LQ   SGL VG  YAL+ALGF++ +  +  +NF+ G+FV  G   GM  +FL+       
Sbjct: 5   LQLAFSGLTVGAIYALIALGFTLIYNASDVINFAQGDFVMIG---GMGTVFLMAA----- 56

Query: 66  TTFGDAIPGAGAQLFALVAALGVMGLLGWLLYVLGVRPFAGRPGMAWVMSTLGFGVILQS 125
              G A+P A   L A+VAA+    L+G LL+ L + P  G   +  +M T+G  + ++ 
Sbjct: 57  ---GLALPVAA--LLAVVAAV----LVGLLLHRLAIEPARGASPVTLIMITIGASIFIKG 107

Query: 126 VGLAIWGPKPVVVPAPVGDTVLRMFGVGVRPQELLTLGVAVVVMFGFDRVMNRTMVGKAM 185
           V   I+  +   +PA  GDT + + G  + PQ L  +G A+ ++      +  T+VGKA+
Sbjct: 108 VSQIIFDKQFHSLPAFSGDTPIPVGGATILPQSLWVMGTALALVVALYLFLEHTLVGKAV 167

Query: 186 RAVAQNGNVASLMGINTNAMMIGAFVVSSALAGLSGFLLAPIAQASLFMGLTVGLKGFSG 245
            A A N   A L+GIN   ++  AF +S+A+  L+G +  PI      +G    LKGF+ 
Sbjct: 168 LATAANRLAAKLVGINVALVLALAFGLSAAMGALAGVVATPITLTRYDIGTLFTLKGFAA 227

Query: 246 AMIGGLSNPRGCVIGGFLLGVLESM-VNLWQAQWREVAVFALVILVLAFRPTGLFGRSTV 304
           AM+GG+ NP G V+GG L+G++E+       + +++   F ++++VL F P GLFG  TV
Sbjct: 228 AMLGGMGNPVGAVVGGLLIGLIETFAAGYLSSTYKDAVAFLMILVVLLFMPRGLFGSRTV 287

Query: 305 EKV 307
           E+V
Sbjct: 288 ERV 290