Pairwise Alignments

Query, 307 a.a., High-affinity branched-chain amino acid transport system permease protein LivH (TC 3.A.1.4.1) from Variovorax sp. SCN45

Subject, 309 a.a., Branched-chain amino acid ABC transporter, permease protein LivH (TC 3.A.1.4.1) from Variovorax sp. SCN45

 Score =  160 bits (404), Expect = 5e-44
 Identities = 96/315 (30%), Positives = 169/315 (53%), Gaps = 23/315 (7%)

Query: 5   LLQALISGLAVGGAYALVALGFSITFTTTKTLNFSHGEFVSAGAFIGMSALFLVL-GKPF 63
           LLQ +I+GL +G  YAL+ALG+++ +     +NF+HGE +  GA    + + L+  G P 
Sbjct: 4   LLQQIINGLVLGSMYALIALGYTMVYGIINLINFAHGEVLMVGALTSWTIIGLMKDGMP- 62

Query: 64  DSTTFGDAIPGAGAQLFALVAALGVMGLLGWLLYVLGVRPFAGRPGMAWVMSTLGFGVIL 123
                    PG    L ALV A  V   L +++  +  RP    P +A +++ +G  ++L
Sbjct: 63  -------NTPGWLILLIALVIACIVAATLNFVIEKVAYRPLRNSPKLAPLITAIGMSILL 115

Query: 124 QSVGLAIWGPKPVVVPAPVGDTVLRMFGVGVRPQELLTLGVAVVVMFGFDRVMNRTMVGK 183
           Q++ + IW P     P  +    + + G  + P +++ L V    +     ++N T +G+
Sbjct: 116 QTLAMIIWKPTNKAYPNLLPTDPIHVAGAVISPTQVMILSVTAFSLVVLMWLVNYTKLGR 175

Query: 184 AMRAVAQNGNVASLMGINTNAMMIGAFVVSSALAGLSGFLLAP---IAQASLFMGLTVGL 240
           AMRA A+N  VA+LMGI  + ++   F++ + LA ++G + A    IAQ +  MG   GL
Sbjct: 176 AMRATAENPRVAALMGIRPDMVISATFIIGAVLAAIAGVMYASNYGIAQHA--MGFLPGL 233

Query: 241 KGFSGAMIGGLSNPRGCVIGGFLLGVLESMVN---------LWQAQWREVAVFALVILVL 291
           K F+ A+ GG+ N  G V+GG LLG++E++ +         +  + + ++  F ++I++L
Sbjct: 234 KAFTAAVFGGIGNLAGAVVGGILLGLIEAIGSGYIGTITGGVLGSNYSDIFAFIVLIVML 293

Query: 292 AFRPTGLFGRSTVEK 306
             RP+GL G    ++
Sbjct: 294 TLRPSGLLGERVADR 308