Pairwise Alignments

Query, 307 a.a., High-affinity branched-chain amino acid transport system permease protein LivH (TC 3.A.1.4.1) from Variovorax sp. SCN45

Subject, 291 a.a., branched-chain amino acid ABC transporter permease from Magnetospirillum magneticum AMB-1

 Score =  117 bits (293), Expect = 3e-31
 Identities = 91/304 (29%), Positives = 146/304 (48%), Gaps = 19/304 (6%)

Query: 1   MVVALLQALISGLAVGGAYALVALGFSITFTTTKTLNFSHGEFVSAGAFIGMSALFLVLG 60
           M+   LQ+L SG+  G  YAL+ALG ++ F T + +N +HGE V  GA+I  +A   +  
Sbjct: 1   MLELTLQSLFSGVLSGAYYALIALGLALVFGTMRVINLAHGELVLLGAYISYTAEEKLGL 60

Query: 61  KPFDSTTFGDAIPGAGAQLFALVAALGVMGLLGWLLYVLGVRPFAGRPGMAWVMSTLGFG 120
            P                L +L  AL V+     L+Y L V        +  ++ T G G
Sbjct: 61  DP----------------LASLPLALAVVVGTAILVYYL-VSLIKKDRELNSLILTFGIG 103

Query: 121 VILQSVGLAIWGPKPVVVPAP-VGDTVLRMFGVGVRPQELLTLGVAVVVMFGFDRVMNRT 179
           VIL +  L IW         P   D  +    +     EL+  G  + ++      + ++
Sbjct: 104 VILTNAVLMIWSADIHSATTPWYHDATILFDTLFAMQAELVFAGFGIALVGAVWWWLEKS 163

Query: 180 MVGKAMRAVAQNGNVASLMGINTNAMMIGAFVVSSALAGLSGFLLAPIAQASLFMGLTVG 239
             G+A+RAVA N + A LMG+N     I +F VS  LA ++G  +         MG  + 
Sbjct: 164 WYGRALRAVASNRDAAKLMGVNPQLTEILSFAVSGVLATVAGIAIYTAKVIQPAMGHHLT 223

Query: 240 LKGFSGAMIGGLSNPRGCVIGGFLLGVLESM-VNLWQAQWREVAVFALVILVLAFRPTGL 298
           +K F   ++ G+ +  G ++G  LLG++ES+ V +  +  +E+A   L ++VL   P+GL
Sbjct: 224 VKAFIITVLAGMGSVPGVLLGAVLLGIVESLTVTMASSALQELAGMVLFLVVLLLMPSGL 283

Query: 299 FGRS 302
           FGR+
Sbjct: 284 FGRA 287