Pairwise Alignments

Query, 399 a.a., ABC transporter, substrate-binding protein (cluster 4, leucine/isoleucine/valine/benzoate) from Variovorax sp. SCN45

Subject, 378 a.a., branched-chain amino acid ABC transporter, periplasmic amino acid-binding protein (braC-like) from Pseudomonas putida KT2440

 Score = 89.4 bits (220), Expect = 2e-22
 Identities = 100/382 (26%), Positives = 162/382 (42%), Gaps = 28/382 (7%)

Query: 8   KTLLATAAFAAFTAGASAQ-DIKLGYNGDLSASPSAQSGQAAVLGMEAAIADINAAGGVL 66
           K  LA A   A    +  Q D+K+G  G ++ + +A  G+  + G +AA   INAAGGV 
Sbjct: 8   KGFLALAVATALGVSSYVQADVKIGVAGPMTGA-NAAFGEQYMKGAQAAADKINAAGGVN 66

Query: 67  GKKLALVTRDDVSAPPKSIQNMSDLIDNEKVVAVFGPTNSGNAMAWKHIANQKKIPVLGN 126
           G+K+ LV  DD   P +++   + L+D +KV+ V G   S N +    + ++  +  +  
Sbjct: 67  GEKIVLVKGDDACEPKQAVAVANRLVDQDKVIGVVGHFCSSNTIPASEVYDEAGVIAITP 126

Query: 127 VGSGTDITKPMSPGADNYMFRVSMVDREQVAALMAYVKKNTAGSKVVGLMAETTGYGQGG 186
             +   +T+       + MFR+   D +Q      Y+     G KV  L  + T YGQG 
Sbjct: 127 GSTNPQVTE----RGLSAMFRMCGRDDQQGIVAGDYIVDVLKGKKVAVLHDKDT-YGQGL 181

Query: 187 LKDMEEIAKLQDIKIAATERFGVGDTDMTSQLSKMKAANVDTVVVWAQGTPIAQLVRSME 246
               +   + + +K    E    G+ D ++ ++K+++   D V           LVR + 
Sbjct: 182 ADATKAQLEKRGVKPVLYEGLTRGEKDFSAVVTKIRSTGADVVYFGGLHPEAGPLVRQLR 241

Query: 247 KINYFPLTLTSWAADNIT---FYDAAGKALAEKPIFMRTVSETRTPAQQKL----FDRIG 299
           +     +   S   D I        AG A     ++M   ++ R     K     F + G
Sbjct: 242 EQGLKDVKFMS--DDGIVTDELVSTAGGAQYVDGVYMTFGADPRLLPDSKAVVEEFRKAG 299

Query: 300 TKLKAPGSFSFALHGYDSMQLLAQAMKQANSTDGAAVRAALEDLKTPVQGVLKTYEKPFS 359
           T+ +      + L+ Y S+Q LA A   A S  G      L+    PVQ V+   EK + 
Sbjct: 300 TEPE-----GYTLYAYASLQALAAAFNGAKSNKGEDAAKWLK--ANPVQTVMG--EKKWD 350

Query: 360 KTNHEALTAKDLVWIRW-KDGK 380
                 LT  D V  +W K GK
Sbjct: 351 SKGD--LTVSDYVVYQWDKTGK 370