Pairwise Alignments

Query, 399 a.a., ABC transporter, substrate-binding protein (cluster 4, leucine/isoleucine/valine/benzoate) from Variovorax sp. SCN45

Subject, 371 a.a., branched-chain amino acids ABC transporter - periplasmic leucine binding subunit from Pseudomonas putida KT2440

 Score = 92.4 bits (228), Expect = 2e-23
 Identities = 97/379 (25%), Positives = 155/379 (40%), Gaps = 19/379 (5%)

Query: 4   LRLYKTLLATAAFAAFTAGASAQDIKLGYNGDLSASPSAQSGQAAVLGMEAAIADINAAG 63
           +++ K   A       +   +A  IK+G  G     P  Q G    +G + AI DINAAG
Sbjct: 2   IKISKLFAAMVLAGVASHSFAADTIKIGIAGP-KTGPVTQYGDMQFIGAKQAIKDINAAG 60

Query: 64  GVLGKKLALVTRDDVSAPPKSIQNMSDLIDNEKVVAVFGPTNSGNAMAWKHIANQKKIPV 123
           GV GK L     DD +  PK    +++ + N+ V  V G   S +      I   + + +
Sbjct: 61  GVDGKMLEAKEYDD-ACDPKQAVAVANKVVNDGVKFVVGHLCSSSTQPASDIYEDEGVIM 119

Query: 124 LGNVGSGTDITKPMSPGADNY--MFRVSMVDREQVAALMAYVKKNTAGSKVVGLMAETTG 181
           +    +  +IT      A  Y  +FR   +D  Q  A   Y+  +    KVV ++ +   
Sbjct: 120 ITPAATSPEIT------ARGYKLIFRTIGLDSAQGPAAGNYIADHVK-PKVVAVLHDKQQ 172

Query: 182 YGQGGLKDMEEIAKLQDIKIAATERFGVGDTDMTSQLSKMKAANVDTVVVWAQGTPIAQL 241
           YG+G    +++  + +  K+A  E    GD D +S + K+K  NVD V        +  +
Sbjct: 173 YGEGIATAVKQTLESKGTKVAVFEGLNAGDKDFSSIIQKLKQNNVDFVYYGGYHPELGLI 232

Query: 242 VRSMEKINYFPLTLTSWAADNITFYDAAGKALAEKPIFMRTVSETRTPAQQKLFDRIGTK 301
           +R  ++       +      N +    A  A +E  +     S    PA +K+ D I   
Sbjct: 233 LRQAQEKGLKAKFMGPEGVGNDSISQIAQNA-SEGLLVTLPKSFDADPANKKIVDAIKAD 291

Query: 302 LKAPGSFSFALHGYDSMQLLAQAMKQANSTDGAAVRAALEDLKTPVQGVLKTYEKPFSKT 361
            K P S  F    Y +++L+AQ +K+A S D   V  A+       +G  KT     S  
Sbjct: 292 GKDP-SGPFVFPAYSAVELIAQGIKKAGSDDTDKVAEAIH------KGTFKTPTGDLSFD 344

Query: 362 NHEALTAKDLVWIRWKDGK 380
           +   L     V   W  GK
Sbjct: 345 DKGDLKDFKFVVYEWHFGK 363