Pairwise Alignments

Query, 280 a.a., Transcriptional regulator, IclR family from Variovorax sp. SCN45

Subject, 282 a.a., transcriptional repressor for the yiaKLMNO-lyxK-sgbHUE operon from Escherichia coli BL21

 Score = 53.5 bits (127), Expect = 5e-12
 Identities = 64/259 (24%), Positives = 99/259 (38%), Gaps = 6/259 (2%)

Query: 17  EKPRRGIQSVEIGTQLLVALGRHVAPMALRDLGKAAGVPVGKAHPYLVSFLKVGFVVQ-D 75
           E+P  G QS+  G  L+  L  +     L  L + AG+     H  L      G+V    
Sbjct: 18  ERPA-GSQSLFRGLMLIEILSNYPNGCPLAHLSELAGLNKSTVHRLLQGLQSCGYVTTAP 76

Query: 76  GAGRYELGPLALQLGLAKLQRLDPIREASPLIEALASETEQSIAVAV-WGNFGPTVVRLE 134
            AG Y L    + +G   L  L+ I  A+P +EAL   T ++I  +    +    + +LE
Sbjct: 77  AAGSYRLTTKFIAVGQKALSSLNIIHIAAPHLEALNIATGETINFSSREDDHAILIYKLE 136

Query: 135 EPIHPLHVNLRTGTVMSLAYTATGRLFAAYLPPKVVEKMMLEDLARTRPADGRGSTTELS 194
                L      G  M L  +A G+++ A+  P  V+          +P   R + TEL 
Sbjct: 137 PTTGMLRTRAYIGQHMPLYCSAMGKIYMAFGHPDYVKSYWESHQHEIQPLT-RNTITELP 195

Query: 195 HSQIEALLVETRLHGMSRTLGQPIPGIDAFCAPVFDSTNNLVLGITAMGPEATFDSDWNG 254
               E  L   R  G +    +   G+     PVFD    +   ++     +        
Sbjct: 196 AMFDE--LAHIRESGAAMDREENELGVSCIAVPVFDIYGRVPYAVSISLSTSRLKQVGEK 253

Query: 255 RVAVPLKACALEISRRLGF 273
            +  PL+  A  IS  LGF
Sbjct: 254 NLLKPLRETAQAISNELGF 272