Pairwise Alignments

Query, 363 a.a., hypothetical protein from Variovorax sp. SCN45

Subject, 356 a.a., transcriptional regulator, ornithine utilization from Pseudomonas putida KT2440

 Score =  115 bits (289), Expect = 1e-30
 Identities = 83/314 (26%), Positives = 144/314 (45%), Gaps = 7/314 (2%)

Query: 34  GASASELLRGTGLDESELLSYSRKVSYAQMQTILRNAVALSPGPEAAFEAGRRVSLASLG 93
           G  AS LL G+G+  ++L     +++  Q   +  NAVA     +   E G+R+ ++  G
Sbjct: 49  GCEASALLAGSGIGPADLGHADARITTQQELQVCANAVARRE--DIGLELGQRMRVSCYG 106

Query: 94  VWGLGMTSARTYRELAEFVVKYQWVLGPMVAFDFHEVDANAWWTYTPLLVSDPRSTEYQM 153
           + G  + S+ T  +     ++Y  +LG +      +     W++ +    S   S     
Sbjct: 107 MLGYALLSSATLGDALRLALQYPALLGTVFKLRLLDDGQRVWFSASDYQDSPALSA---F 163

Query: 154 SMEFALCMGYRMSEIAFGPGFKALAISLRYDAPAHASLYEHFFGCPILFGQPHDGFHFDP 213
           + EF L     + +   G     L     +  P + +LY   F CPI F    + F F+ 
Sbjct: 164 NAEFCLVSLKVICDDLLGRPLPLLGARFEHPRPGYHALYAGAFQCPIGFAAEDNAFAFER 223

Query: 214 ALLECELPNANAISMAMVRAGCEVLLKKLSTRGGIEARVRELLSAQRPEKPALAVDEIAN 273
             L+  LP A+ I+   +   C  L  + + R     R+R+LL+ Q    P L  + +A 
Sbjct: 224 RWLDMPLPLADPITHKAMSERCRRLNLEFTGRQAWLGRIRQLLAQQLDAAPGL--EGLAR 281

Query: 274 ELDMNPRTLHRKLKEAGTSFRGLRSNVLMDQAIAYLRDTDLTQEEIAARLGFSDGSNFRQ 333
           +++ + RTL R L+  G+S++ L   +  ++A   L D  +    IA  LGFS+ ++FR 
Sbjct: 282 QMNCSSRTLRRHLQALGSSYQQLLDELRFERAKQLLADEQMPIYRIAETLGFSETASFRH 341

Query: 334 AFKRWTNRQPGDFR 347
           AF+RW+   P  FR
Sbjct: 342 AFQRWSGVAPSHFR 355