Pairwise Alignments

Query, 499 a.a., Deoxyribodipyrimidine photolyase (EC 4.1.99.3) from Variovorax sp. SCN45

Subject, 481 a.a., deoxyribodipyrimidine photolyase from Pseudomonas simiae WCS417

 Score =  290 bits (742), Expect = 8e-83
 Identities = 182/485 (37%), Positives = 265/485 (54%), Gaps = 31/485 (6%)

Query: 16  LMWFRRDLRVDDNAALYRALRACRQVVCVFVFDKAILDPLPTVDRRVEFIRESLLELEAE 75
           L+W R DLR+ DN AL  A +    +  V++              +V+F   +L +L   
Sbjct: 3   LIWLRTDLRLHDNTALAAASQR-GPIAAVYLITPQQWQSHDDAPCKVDFWLRNLQDLSKT 61

Query: 76  LRALGGALIVRHGLAAQEIP----ALAHDLDVQAVFANRDDEPDALERDAKVFGALANAG 131
           L AL   L++R      + P     L  +L V++V  N +       RDA V  AL   G
Sbjct: 62  LGALNIPLLIRTAATWDQAPDVLSKLCRELSVESVHVNEEYGIHESRRDAAVSKALEADG 121

Query: 132 VTFHTYKDSTVFDRDEVMTKTGQPYTVFTPYKRAWLAKVDSFFLKSYPVRSHADALVPPP 191
           VTFH Y D   F    V+TKTG  + VF+ +++    ++ S    + P    A     P 
Sbjct: 122 VTFHRYLDQLFFQPGSVLTKTGTYFQVFSQFRKVCYTRLHS----ALPRMVAAPKAQAPL 177

Query: 192 EAYREPMPSLGELGFEKSNLSTLEI-PTGTRGAGTLFEDFFER-IDRYDEARNFPAVRGP 249
           +   +P+P+  E GF   + S   + P G   A    + F ++ I  Y + R+FPA  G 
Sbjct: 178 KLKSDPVPNTVE-GFAPPSDSLRALWPAGEDEARRRLDAFADQQISYYKDERDFPAKPGT 236

Query: 250 SYMGVHLRFGTVSIRQMASLAHQLS----LQGNAGAATWLSELIWRDFYFQILAHFPYVH 305
           S +  +L  G VS RQ    A Q +      G+ GA TW++EL+WR+FY  IL  +P V 
Sbjct: 237 SQLSAYLAAGVVSPRQCLHAALQTNGGEFESGDLGAITWINELLWREFYKHILVGYPRV- 295

Query: 306 TGGESKSFRPEYDKIQWHHGKHADQLFEAWCQGRTGYPLVDAAMLQINQSGYMHNRLRMV 365
                ++FRPE + + W   ++A +   AW + RTG P++DAAM Q+ ++G+MHNRLRMV
Sbjct: 296 --SRHRAFRPETEAVAW---RNAPKDLAAWQEARTGLPIIDAAMRQLLETGWMHNRLRMV 350

Query: 366 VASFLCKDLGLDWRRGEAYFALHLNDFELASNNGGWQWASSSGCDAQPYFRIFNPVTQSE 425
           VA FL K+L +DWR GE +F  HL D +LA+NNGGWQW+SS+G D+ PYFRIF+P++QSE
Sbjct: 351 VAMFLTKNLLIDWREGERFFMRHLIDGDLAANNGGWQWSSSTGTDSAPYFRIFSPLSQSE 410

Query: 426 RFDPEGKFIRRYLPQLAGLSNAAIHAPWQASPVELEAAGIKLG-ETYPKPVVDHAEAREK 484
           +FD EG FI+ +LP+LA L+   +H P        EAAG   G   YP+ +VD  ++RE+
Sbjct: 411 KFDAEGVFIKHWLPELAALNKKDVHNP--------EAAGGLFGVADYPRSIVDLKKSRER 462

Query: 485 TLQRY 489
            L  +
Sbjct: 463 ALAAF 467