Pairwise Alignments

Query, 499 a.a., Deoxyribodipyrimidine photolyase (EC 4.1.99.3) from Variovorax sp. SCN45

Subject, 480 a.a., deoxyribodipyrimidine photolyase from Pseudomonas putida KT2440

 Score =  268 bits (686), Expect = 2e-76
 Identities = 168/484 (34%), Positives = 257/484 (53%), Gaps = 29/484 (5%)

Query: 16  LMWFRRDLRVDDNAALYRALRACRQVVCVFVFDKAILDPLPTVDRRVEFIRESLLELEAE 75
           L W R DLR+DDN AL  +       + +++            D +V+F   +L +L   
Sbjct: 3   LTWLRSDLRIDDNTALSASTER-GPTIALWLVSPGQWQAHDDADCKVDFWLRNLHDLRQS 61

Query: 76  LRALGGALIVRH----GLAAQEIPALAHDLDVQAVFANRDDEPDALERDAKVFGALANAG 131
           L  L   L++R       A Q +  +     VQ+V  N +   +   RD      L  + 
Sbjct: 62  LEKLNIPLLIRTIDTWDQAPQAVLDICRQHQVQSVHWNEEYGINEQRRDDATRAMLEKSA 121

Query: 132 VTFHTYKDSTVFDRDEVMTKTGQPYTVFTPYKRAWLAKVDSFFLKSYPVRSHADALVPPP 191
           +  H++ D   F    V+T++G  + VF+ +K+  L  +     +S P  +       P 
Sbjct: 122 IQAHSHLDQLFFRPGTVLTRSGDYFQVFSQFKKTCLEHLH----RSLPALARRVKRQAPL 177

Query: 192 EAYREPMPSLGELGFEKSNLSTLEI-PTGTRGAGTLFEDFF-ERIDRYDEARNFPAVRGP 249
               +P+P   E GF K+  +  +  P G   A +    F  E ID Y   R+ PA  G 
Sbjct: 178 NIGSDPIPQHVE-GFGKTTPALRDHWPAGEAEAQSRLSRFLDETIDDYHHLRDLPAKPGT 236

Query: 250 SYMGVHLRFGTVSIRQM--ASLAHQLSL--QGNAGAATWLSELIWRDFYFQILAHFPYVH 305
           S +  +L  G +S RQ    +LA        G+ G  TW++EL+WR+FY  IL+ +P V 
Sbjct: 237 SQLSPYLAAGVISPRQCLHGALAGNRGEFDSGSTGVQTWINELLWREFYKHILSGYPQV- 295

Query: 306 TGGESKSFRPEYDKIQWHHGKHADQLFEAWCQGRTGYPLVDAAMLQINQSGYMHNRLRMV 365
                ++FR + + + W   + A     AW QGRTG+P++DAAM Q+  +G+MHNRLRMV
Sbjct: 296 --SRHRAFRAQTEALPW---RDAPADLAAWEQGRTGFPIIDAAMRQLLHTGWMHNRLRMV 350

Query: 366 VASFLCKDLGLDWRRGEAYFALHLNDFELASNNGGWQWASSSGCDAQPYFRIFNPVTQSE 425
           VA FL K+L +DWR+GE +F  HL D +LA+NNGGWQW++S+G DA PYFRIFNPV+QS+
Sbjct: 351 VAMFLSKNLLIDWRKGERHFMRHLIDGDLAANNGGWQWSASTGTDAVPYFRIFNPVSQSQ 410

Query: 426 RFDPEGKFIRRYLPQLAGLSNAAIHAPWQASPVELEAAGIKLGETYPKPVVDHAEAREKT 485
           RFDP+G+FIR ++P+L  L   AIH P       +++  +    +Y  P+VD + +R++ 
Sbjct: 411 RFDPQGRFIRHWVPELQELDEKAIHQP-------IKSTDLFGNTSYLSPIVDLSSSRQRA 463

Query: 486 LQRY 489
           L+ +
Sbjct: 464 LEAF 467