Pairwise Alignments

Query, 499 a.a., Deoxyribodipyrimidine photolyase (EC 4.1.99.3) from Variovorax sp. SCN45

Subject, 472 a.a., deoxyribodipyrimidine photolyase, FAD-binding (NCBI) from Escherichia coli BW25113

 Score =  294 bits (752), Expect = 5e-84
 Identities = 186/491 (37%), Positives = 264/491 (53%), Gaps = 39/491 (7%)

Query: 16  LMWFRRDLRVDDNAALYRALR-ACRQVVCVFVFDKAILDPLPTVDRRVEFIRESLLELEA 74
           L+WFR+DLR+ DN AL  A R +  +V+ +++             R+ E I   L  L+ 
Sbjct: 5   LVWFRQDLRLHDNLALAAACRNSSARVLALYIATPRQWATHNMSPRQAELINAQLNGLQI 64

Query: 75  ELRALGGALIVRHG----LAAQEIPALAHDLDVQAVFANRDDEPDALERDAKVFGALANA 130
            L   G  L+ R       + + +  +  +  V  +F N   E +   RD +V  AL N 
Sbjct: 65  ALAEKGIPLLFREVDDFVASVEIVKQVCAENSVTHLFYNYQYEVNERARDVEVERALRN- 123

Query: 131 GVTFHTYKDSTVFDRDEVMTKTGQPYTVFTPYKRAWLAKVDSFFLKSYPVRSHADALVPP 190
            V    + DS +     VMT   + Y VFTP+K AWL ++          R      V  
Sbjct: 124 -VVCEGFDDSVILPPGAVMTGNHEMYKVFTPFKNAWLKRL----------REGMPECVAA 172

Query: 191 PEAYR----EPMPSLGELGFEKSNLSTLEIPTGTRGAGTLFEDFFER-IDRYDEARNFPA 245
           P+       EP PS+  L + + +  T   P   + A      F +     Y++ R+FPA
Sbjct: 173 PKVRSSGSIEPSPSI-TLNYPRQSFDTAHFPVEEKAAIAQLRQFCQNGAGEYEQQRDFPA 231

Query: 246 VRGPSYMGVHLRFGTVSIRQMAS--LAHQ-LSLQGNAGAATWLSELIWRDFYFQILAHFP 302
           V G S +   L  G +S RQ     LA Q  +L G AG+  WL+ELIWR+FY  ++ + P
Sbjct: 232 VEGTSRLSASLATGGLSPRQCLHRLLAEQPQALDGGAGSV-WLNELIWREFYRHLITYHP 290

Query: 303 YVHTGGESKSFRPEYDKIQWHHGKHADQLFEAWCQGRTGYPLVDAAMLQINQSGYMHNRL 362
            +    + + F    D++QW          +AW +G+TGYP+VDAAM Q+N +G+MHNRL
Sbjct: 291 SLC---KHRPFIAWTDRVQWQSNPAH---LQAWQEGKTGYPIVDAAMRQLNSTGWMHNRL 344

Query: 363 RMVVASFLCKDLGLDWRRGEAYFALHLNDFELASNNGGWQWASSSGCDAQPYFRIFNPVT 422
           RM+ ASFL KDL +DWR GE YF   L D +LA+NNGGWQWA+S+G DA PYFRIFNP T
Sbjct: 345 RMITASFLVKDLLIDWREGERYFMSQLIDGDLAANNGGWQWAASTGTDAAPYFRIFNPTT 404

Query: 423 QSERFDPEGKFIRRYLPQLAGLSNAAIHAPWQASPVELEAAGIKLGETYPKPVVDHAEAR 482
           Q E+FD EG+FIR++LP+L  +    +H PW+ +    + AG+ L   YP+P+V+H EAR
Sbjct: 405 QGEKFDHEGEFIRQWLPELRDVPGKVVHEPWKWA----QKAGVTL--DYPQPIVEHKEAR 458

Query: 483 EKTLQRYGVAR 493
            +TL  Y  AR
Sbjct: 459 VQTLAAYEAAR 469