Pairwise Alignments
Query, 2069 a.a., Signal transduction histidine kinase CheA from Variovorax sp. SCN45
Subject, 735 a.a., chemotaxis protein CheA from Pseudomonas simiae WCS417
Score = 208 bits (529), Expect = 3e-57
Identities = 189/726 (26%), Positives = 314/726 (43%), Gaps = 103/726 (14%)
Query: 1256 DVDLFPIFEEEAAELLPQLGESLRQWAHHPDDSAPRAAVLRTLHTLKGSARLAGAMRLGE 1315
D ++ F EA E+L QL E L + PDD+ A+ R HT+KG A L E
Sbjct: 6 DEEILQDFLVEAGEILEQLSEQLVELESRPDDANLLNAIFRGFHTVKGGAGFLQLHELVE 65
Query: 1316 RAHRMESEIELL--GSQGAERADIEKLLGRLDALQATFDALR------------------ 1355
H E+ ++L G + + ++ +L LDA+ F +R
Sbjct: 66 CCHIAENVFDILRKGERHVDSELMDVILEALDAVNGMFSEVRERAPITAATPELLAALAR 125
Query: 1356 ----------------------AADDATQVELAQLVAS-----ASASAPAAQLVQVAPEA 1388
A D T E QL+ S A A APAA + E
Sbjct: 126 YAEPADLSAAPVAEAAPEPVAEAEPDVTDSEFEQLLNSLSAVKAEAEAPAAAVAAPTSED 185
Query: 1389 GVPANDESAAPVAGDEDGETADDIAAAAPATASALQPRPAPALLAP--LRAVSSQAVRIR 1446
A ES + AD + AA + A A A + A+ Q
Sbjct: 186 ITDAEFESLLDQLHGKGQFAADAVTPAAVSEAPAAPTANANTDITDDEFEALLDQLHGKG 245
Query: 1447 TQLLDRL--------------VAQTGEVIITRSRLEAELGQLRG--------------SL 1478
T + D L A G+ +I+ E+ L +L G +
Sbjct: 246 TFVADALPEVAATAAAPAAASAAPAGDGLISDHEFESLLDELHGKGKFSEVAPAATVATA 305
Query: 1479 ADLTGNLDRLRQQLRDIEVQAESQMQSRLAQA----KDSQQSFDPLEFDRFTRVQELTRM 1534
A + A + +R A A K + ++ + D R+ ++ M
Sbjct: 306 APVAAKAAAPAPAPAAKPAPAAAPAPARAAAAPVADKPASEAETTVRVDT-ARLDDIMNM 364
Query: 1535 MAESVNDVATVQRTLQKTVQATEDDLSVQARQ-----TRELQRGLLRTRMVEFEGISDRL 1589
+ E V V+ L + ++ D+ +A T +LQ +++TRM + + R
Sbjct: 365 VGELV----LVRNRLVRLGLSSGDEAMQKAVSNLDVVTADLQTAVMKTRMQPIKKVFGRF 420
Query: 1590 YRVVRQASKDTGKQVRLDIVGGSIEMDRGVLDRMTPAFEHLLRNCVAHGIEDAAAREKAG 1649
R+VR ++ K++ L++VG ++D+ +++ + HL+RN V HG+E RE +G
Sbjct: 421 PRLVRDLARQLKKEINLELVGEETDLDKNLVEALADPLVHLVRNAVDHGVETPEEREASG 480
Query: 1650 KDASGLIVIDLHHEGNDVSVSFRDDGAGLD---RKRIAERARVLGLIGADQELSAEEATE 1706
K +G +++ EG+ + +S DDG G+D + IA + V+ AD+ L+ E
Sbjct: 481 KSRNGKVILAAEQEGDHILLSITDDGKGMDPAILRNIAVKRGVMDKDAADR-LTDSECYN 539
Query: 1707 LIFKPGFSTAGQVSELAGRGIGMDVVRAQIAALGGRIETHSTPGQGTTFKLVLPLTTAVT 1766
LIF PGFST ++S+++GRG+GMDVV+ +I+ L G I +ST GQG+ + +PLT A+
Sbjct: 540 LIFAPGFSTKTEISDVSGRGVGMDVVKTKISQLNGSINIYSTKGQGSKIVIKVPLTLAIM 599
Query: 1767 HVVMLRAGEVSIGVPSNLVELVQRVSGTDLDAAYLHNSHP---FGSEQVPFYWAGALLQA 1823
+M+ G + P LV V + DL + + + +P ++ L A
Sbjct: 600 PTLMVMLGNQAFAFP--LVN-VNEIFHLDLSRTNVVDGQEVVIVRDKALPLFYLKRWLVA 656
Query: 1824 STRSEHAAAKNNTLVVVRSAAQRVALHVDEVLGNQEVVVKNLGPQLARLPGLAGISVLAS 1883
S ++H + +V++ QR+ VD+++G +EVV+K LG L PG++G ++
Sbjct: 657 S--AKHEEQREGHVVILSVGTQRIGFVVDQLVGQEEVVIKPLGKMLQGTPGMSGATITGD 714
Query: 1884 GAVALI 1889
G +ALI
Sbjct: 715 GRIALI 720
Score = 74.7 bits (182), Expect = 4e-17
Identities = 111/416 (26%), Positives = 151/416 (36%), Gaps = 95/416 (22%)
Query: 662 EEDDLQNIFLDEAREVVQNGLEAIAELASYPDDTEELTILRRAFHTLKGSSRMVGLTEFG 721
+E+ LQ+ FL EA E+++ E + EL S PDD L + R FHT+KG + + L E
Sbjct: 6 DEEILQD-FLVEAGEILEQLSEQLVELESRPDDANLLNAIFRGFHTVKGGAGFLQLHELV 64
Query: 722 DAAWSLEQVLNTWLADQRAATPELLSGTERTLREFSEWVEAIAAGQPHSWQAASFSRVAN 781
+ E V + +R EL+ +EA+ A N
Sbjct: 65 ECCHIAENVFDILRKGERHVDSELMDVI----------LEALDA--------------VN 100
Query: 782 ALLAGEPVPPPVRVADAEALAVAARHIAAETPVAAPAVAPLPMPALPDLPDLSLTPEPVS 841
+ + P+ A E LA AR+ A PA DLS
Sbjct: 101 GMFSEVRERAPITAATPELLAALARY-------AEPA-------------DLS------- 133
Query: 842 HVEPVAHVAPEPVPEPALEPLDWHAPAQSPEVDDDFAS-TDFIDFESKQNTEPAPLLSLP 900
PVA APEPV E A+ D +F + + + PA ++ P
Sbjct: 134 -AAPVAEAAPEPVAE-----------AEPDVTDSEFEQLLNSLSAVKAEAEAPAAAVAAP 181
Query: 901 SGD-----EFDFLAPAKTQARAEPEPVVPPAAEPEVPAEPVASVETE--SPAATSLPD-- 951
+ + EF+ L V PAA E PA P A+ T+ +L D
Sbjct: 182 TSEDITDAEFESLLDQLHGKGQFAADAVTPAAVSEAPAAPTANANTDITDDEFEALLDQL 241
Query: 952 -----FVWEPEPE-PEPVPVPAQAQEPEVIEAARPPHE-EEPKPELQ----------LAA 994
FV + PE PA A + HE E EL A
Sbjct: 242 HGKGTFVADALPEVAATAAAPAAASAAPAGDGLISDHEFESLLDELHGKGKFSEVAPAAT 301
Query: 995 EPEQAPEAAAEPEPEPAPAAIEAAPEPEPEPAPVIAEVLAPIVEAPAAPVEAQILV 1050
AP AA P PAPA A P P PAP A AP+ + PA+ E + V
Sbjct: 302 VATAAPVAAKAAAPAPAPA---AKPAPAAAPAPARA-AAAPVADKPASEAETTVRV 353