Pairwise Alignments
Query, 2069 a.a., Signal transduction histidine kinase CheA from Variovorax sp. SCN45
Subject, 754 a.a., chemotaxis protein CheA from Pseudomonas simiae WCS417
Score = 240 bits (612), Expect = 6e-67
Identities = 219/810 (27%), Positives = 357/810 (44%), Gaps = 89/810 (10%)
Query: 1256 DVDLFPIFEEEAAELLPQLGESLRQWAHHPDDSAPRAAVLRTLHTLKGSARLAGAMRLGE 1315
D L +F EA L L +P + A +R H+LKG+AR+ G
Sbjct: 8 DASLLELFSLEADAQTQVLSAGLLALERNPTQADQLEACMRAAHSLKGAARIVGVDAGVS 67
Query: 1316 RAHRMESEIELLGSQGAERADIEKLLGRLDAL-QATFDALRAADDATQVELAQLVASASA 1374
+H ME + L S R ++ +DAL Q T +R A V A + A +
Sbjct: 68 VSHVME---DCLVSAQESRLYLQP--EHIDALLQGTDLLMRIATPGNNVGPADIEAYVAL 122
Query: 1375 SAPAAQLVQVAPEAGVPANDESAAPVAGDEDGETADDIAAAAPATASALQPRPAPALLAP 1434
D S APV E + A P +P PAP ++A
Sbjct: 123 MERLL--------------DPSQAPVKAPPP-EPVPVVEALPP------EPEPAPPVVAE 161
Query: 1435 -------LRAVSSQAVRIRTQLLDRLVAQTGEVIITRSRLEAELGQLRGSLADLTGNLDR 1487
+ + +R+ + L+ L+ + + ++ RL+ L L
Sbjct: 162 PPRHNKRMTEGGERVLRVTAERLNSLLDLSSKSLVETQRLKPYLASL------------- 208
Query: 1488 LRQQLRDIEVQAESQMQSRLAQAKDSQQSFDPLEFDRFTRVQELTRMMAESVNDVATVQR 1547
Q+L+ I+ Q+ R D Q + L + + + R+++E+ +A
Sbjct: 209 --QRLKRIQSQSV-----RALDTLDGQLKTENLNLEAQEALADTRRLLSEAQALLA---- 257
Query: 1548 TLQKTVQATEDDLSVQARQTRE-LQRGLLRTRMVEFEGISDRLYRVVRQASKDTGKQVRL 1606
+KT + D+ QA Q + L L RM F + R+VR + GKQVRL
Sbjct: 258 --EKTAEL--DEFGWQAGQRAQVLYDTALACRMRPFADVLAGQVRMVRDLGRSLGKQVRL 313
Query: 1607 DIVGGSIEMDRGVLDRMTPAFEHLLRNCVAHGIEDAAAREKAGKDASGLIVIDLHHEGND 1666
+I G ++DR VL+++ HLLRN V HGIE R AGK A GLI + H+
Sbjct: 314 EIEGDKTQVDRDVLEKLEAPLTHLLRNAVDHGIEMPEQRLLAGKPAEGLIRLRASHQAGL 373
Query: 1667 VSVSFRDDGAGLDRKRIAERA--RVLGLIGADQELSAEEATELIFKPGFSTAGQVSELAG 1724
+ + DDG G+D +R+ R L + Q LS EE +F PGFS +V+E++G
Sbjct: 374 LVLELSDDGNGVDLERLRGTIVDRHLSPLETAQRLSEEELLTFLFLPGFSLRDKVTEVSG 433
Query: 1725 RGIGMDVVRAQIAALGGRIETHSTPGQGTTFKLVLPLTTAVTHVVMLRAGEVSIGVPSNL 1784
RG+G+D V+ + L G + T GQG+ F L +PLT +V +++ GE + P
Sbjct: 434 RGVGLDAVQHMVRQLRGAVVLEQTAGQGSRFHLEVPLTLSVVRSLVVEVGEEAYAFPLAH 493
Query: 1785 VELVQRVSGTDLDAAYLHNSHPFGSE--QVPFYWAGALLQASTRSEHAAAKNNTLVVVRS 1842
+E + ++ D+ L F E V A LLQ T + +VV+R
Sbjct: 494 IERMCDLAPDDI--VQLEGRQHFWHEGRHVGLVAASQLLQRPTGQN--PSDTLKVVVIRE 549
Query: 1843 AAQRVALHVDEVLGNQEVVVKNLGPQLARLPGLAGISVLASGAVALIYNPVALAAVHGEQ 1902
+ V+ +G + +VV L +L ++ ++ ++L G+V LI + + +
Sbjct: 550 RDAVYGIAVERFIGERTLVVLPLDDRLGKVQDISAGALLDDGSVVLIVDVEDMLRSVDKL 609
Query: 1903 ARERQAAALAAAPARAAAAEAEQGVPQEPVVLAPVTPQIPLVLVVDDSITVRRVTQRLLQ 1962
+ +A ++ A ++ VLVVDDS+TVR + ++LL
Sbjct: 610 LNTGRLERIARRSQQSTEAPRKR------------------VLVVDDSLTVRELQRKLLL 651
Query: 1963 REGYRVSLAADGLQALERLQQERPAVVLSDIEMPRMDGFDLARNIRADSALAELPIIMIT 2022
GY V++A DG+ L+ E ++++DI+MPRMDG +L +R DS L LP+++++
Sbjct: 652 NRGYEVAVAVDGMDGWNALRSEDFDLLITDIDMPRMDGIELVTLLRRDSRLQSLPVMVVS 711
Query: 2023 SRIAEKHRDYARTLGVNHYLGKPYSEEELL 2052
+ E+ R G ++YL K ++ L
Sbjct: 712 YKDREEDRRRGLDAGADYYLAKASFHDDAL 741
Score = 42.4 bits (98), Expect = 3e-07
Identities = 52/187 (27%), Positives = 78/187 (41%), Gaps = 37/187 (19%)
Query: 665 DLQNIFLDEAREVVQNGLEAIAELASYPDDTEELTILRRAFHTLKGSSRMVGLTEFGDAA 724
+L ++ D +V+ GL A L P ++L RA H+LKG++R+VG+ DA
Sbjct: 13 ELFSLEADAQTQVLSAGLLA---LERNPTQADQLEACMRAAHSLKGAARIVGV----DAG 65
Query: 725 WSLEQVLNTWLADQRAATPELLSGTERTLREFSEWVEAIAAGQPHSWQAASFSRVANALL 784
S+ V+ L+S E L E ++A+ G + A+
Sbjct: 66 VSVSHVMEDC----------LVSAQESRLYLQPEHIDALLQGTDLLMRIAT--------- 106
Query: 785 AGEPVPPPVRVADAEALAVAARHI--AAETPVAAPAVAPLP-MPALPDLPDLSLTPEPVS 841
G V P AD EA + ++ PV AP P+P + ALP P+ P P
Sbjct: 107 PGNNVGP----ADIEAYVALMERLLDPSQAPVKAPPPEPVPVVEALPPEPE----PAPPV 158
Query: 842 HVEPVAH 848
EP H
Sbjct: 159 VAEPPRH 165
Score = 28.1 bits (61), Expect = 0.005
Identities = 15/38 (39%), Positives = 19/38 (50%), Gaps = 3/38 (7%)
Query: 959 EPEPVPVPAQAQEPEVIEAARPPHEEEPKPELQLAAEP 996
+P PV A EP + A PP EP+P + AEP
Sbjct: 128 DPSQAPVKAPPPEPVPVVEALPP---EPEPAPPVVAEP 162