Pairwise Alignments

Query, 2069 a.a., Signal transduction histidine kinase CheA from Variovorax sp. SCN45

Subject, 747 a.a., Chemotaxis histidine kinase CheA from Pseudomonas putida KT2440

 Score =  207 bits (528), Expect = 3e-57
 Identities = 203/735 (27%), Positives = 319/735 (43%), Gaps = 109/735 (14%)

Query: 1256 DVDLFPIFEEEAAELLPQLGESLRQWAHHPDDSAPRAAVLRTLHTLKGSARLAGAMRLGE 1315
            D ++   F  EA E+L QL E L +    PDD+    A+ R  HT+KG A       L E
Sbjct: 6    DEEILQDFLVEAGEILEQLSEQLVELESRPDDADLLNAIFRGFHTVKGGAGFLQLNELVE 65

Query: 1316 RAHRMESEIELLGSQGAERADIEKL---LGRLDALQATFDALRAADDATQVELAQLVA-- 1370
              H  E+  ++L  +G  R D E +   L  LD + + F  +R   + T    A L A  
Sbjct: 66   CCHIAENVFDVL-RKGERRVDAELMDVVLEALDTVNSMFGQVRERAEVTPATPALLAALS 124

Query: 1371 -----------SASASAPAAQLVQVAP---------------EAGVPANDESAAPVAGDE 1404
                       +A   AP A +V  AP               E  + + D   A  A DE
Sbjct: 125  RLAEPGAAEAVAAPVPAPVADVVAAAPAEAEEQHQDITDSEFEQLLDSLDAIKAQAAADE 184

Query: 1405 D--GETA----DDIAAAA-PATASALQPRPA--PALLAPLRAVSSQAVRIRT------QL 1449
               GET     D+I  A   +    L  +      + AP  AVSS+ V           L
Sbjct: 185  QMQGETVSGAGDEITDAEFESLLDQLHGKGQFNAEVAAPPVAVSSEVVSDEITDAEFESL 244

Query: 1450 LDRL----VAQTGEVI------------------ITRSRLEAELGQLRGSLADLTGNLDR 1487
            LD+L      Q G +                   I+    EA L QL G      G++  
Sbjct: 245  LDQLHGKGTFQAGALPAAQAPAPAAPDNSAASDEISEHEFEALLDQLHGK-GKFGGDVAA 303

Query: 1488 LR-----QQLRDIEVQAESQMQSRLAQAKDSQQSFDPLEFDRF--------------TRV 1528
            +      Q       +AESQ  ++ A A     +  P    R               T V
Sbjct: 304  VEAPAAVQAQAPAAAKAESQPVAKPAAAPAPSPASKPAAAPRAPAPAAEKHAASEAETTV 363

Query: 1529 QELTRMMAESVNDVATV----QRTLQKTVQATEDDLSVQARQ----TRELQRGLLRTRMV 1580
            +  T  + E +N V  +     R ++  + + ++ +S         T +LQ  +++TRM 
Sbjct: 364  RVDTARLDEIMNMVGELVLVRNRLVRLGLNSGDEAMSKAVSNLDVVTADLQTAVMKTRMQ 423

Query: 1581 EFEGISDRLYRVVRQASKDTGKQVRLDIVGGSIEMDRGVLDRMTPAFEHLLRNCVAHGIE 1640
              + +  R  R+VR  ++   K++ L++VG   ++D+ +++ +     HL+RN V HGIE
Sbjct: 424  PIKKVFGRFPRLVRDLARQLKKEINLELVGEETDLDKNLVEALADPLVHLVRNAVDHGIE 483

Query: 1641 DAAAREKAGKDASGLIVIDLHHEGNDVSVSFRDDGAGLDRKRIAERARVLGLIGAD--QE 1698
                RE +GK  +G +V+    EG+ + +S  DDG G+D   +  +A   GL+  D  + 
Sbjct: 484  MPDEREASGKARTGRVVLSAEQEGDHILLSISDDGKGMDPNILRAKAVEKGLMDKDAAER 543

Query: 1699 LSAEEATELIFKPGFSTAGQVSELAGRGIGMDVVRAQIAALGGRIETHSTPGQGTTFKLV 1758
            LS  +   LIF PGFST  ++S+++GRG+GMDVV+ +I+ L G I   S  GQG+   + 
Sbjct: 544  LSESDCYNLIFAPGFSTKTEISDVSGRGVGMDVVKTKISQLNGSINIFSAKGQGSKIVIK 603

Query: 1759 LPLTTAVTHVVMLRAGEVSIGVPSNLVELVQRVSGTDLDAAYLHNSHP---FGSEQVP-F 1814
            +PLT A+   +M+  G  +   P  LV  V  +   DL    + +         + +P F
Sbjct: 604  VPLTLAIMPTLMVMLGNQAFAFP--LVN-VNEIFHLDLSRTNVVDGQEVVIVRDKALPLF 660

Query: 1815 YWAGALLQASTRSEHAAAKNNTLVVVRSAAQRVALHVDEVLGNQEVVVKNLGPQLARLPG 1874
            Y    L+Q      H       +V++    QR+   VD+++G +EVV+K LG  L   PG
Sbjct: 661  YLKRWLVQGQV---HEEQHEGHVVILSVGTQRIGFVVDQLVGQEEVVIKPLGKMLQGTPG 717

Query: 1875 LAGISVLASGAVALI 1889
            ++G ++   G +ALI
Sbjct: 718  MSGATITGDGRIALI 732



 Score = 57.4 bits (137), Expect = 8e-12
 Identities = 87/372 (23%), Positives = 143/372 (38%), Gaps = 34/372 (9%)

Query: 662  EEDDLQNIFLDEAREVVQNGLEAIAELASYPDDTEELTILRRAFHTLKGSSRMVGLTEFG 721
            +E+ LQ+ FL EA E+++   E + EL S PDD + L  + R FHT+KG +  + L E  
Sbjct: 6    DEEILQD-FLVEAGEILEQLSEQLVELESRPDDADLLNAIFRGFHTVKGGAGFLQLNELV 64

Query: 722  DAAWSLEQVLNTWLADQRAATPELLSGTERTLREFSEWVEAIAAGQPHSWQAASFSRVAN 781
            +     E V +     +R    EL+      L   +     +        + A  +    
Sbjct: 65   ECCHIAENVFDVLRKGERRVDAELMDVVLEALDTVNSMFGQVR-------ERAEVTPATP 117

Query: 782  ALLAGEPVPPPVRVADAEALAVAARHIAAETPVAAPAVAPLPMPALPDLPDLSLTPEPVS 841
            ALLA   +        AEA+A       A+   AAPA A      + D  +     + + 
Sbjct: 118  ALLAA--LSRLAEPGAAEAVAAPVPAPVADVVAAAPAEAEEQHQDITD-SEFEQLLDSLD 174

Query: 842  HVEPVAHVAPEPVPEPALEPLDWHAPAQSPEVDDDFAS-TDFIDFESKQNTE-PAPLLSL 899
             ++  A    +   E         + A     D +F S  D +  + + N E  AP +++
Sbjct: 175  AIKAQAAADEQMQGETV-------SGAGDEITDAEFESLLDQLHGKGQFNAEVAAPPVAV 227

Query: 900  PSGDEFDFLAPAKTQARAEP-------EPVVPPAAEPEVPAEPVASVETESPAATSLPDF 952
             S    D +  A+ ++  +        +    PAA+   PA P  S  ++  +       
Sbjct: 228  SSEVVSDEITDAEFESLLDQLHGKGTFQAGALPAAQAPAPAAPDNSAASDEISEHEFEAL 287

Query: 953  VWEPEPEPEPVPVPAQAQEPEVIEAARPPHEEEPKPELQLAAEPEQAPEAAAEPEPEPAP 1012
            + +   + +     A  + P  ++A  P      K E Q  A+P  AP     P P   P
Sbjct: 288  LDQLHGKGKFGGDVAAVEAPAAVQAQAP---AAAKAESQPVAKPAAAP----APSPASKP 340

Query: 1013 AAIEAAPEPEPE 1024
            AA   AP P  E
Sbjct: 341  AAAPRAPAPAAE 352



 Score = 27.3 bits (59), Expect = 0.008
 Identities = 35/149 (23%), Positives = 54/149 (36%), Gaps = 8/149 (5%)

Query: 1770 MLRAGEVSIGVPSNLVELVQRVSGTDLDAAYLHNSHPFGSEQVPFYWAGALLQASTRSEH 1829
            ++ AGE+   +   LVEL  R    DL  A     H               LQ +   E 
Sbjct: 14   LVEAGEILEQLSEQLVELESRPDDADLLNAIFRGFHTVKG-------GAGFLQLNELVEC 66

Query: 1830 AAAKNNTLVVVRSAAQRVALHVDEVLGNQEVVVKNLGPQLARLPGLAGISVLASGAVALI 1889
                 N   V+R   +RV   + +V+      V ++  Q+     +   +     A++ +
Sbjct: 67   CHIAENVFDVLRKGERRVDAELMDVVLEALDTVNSMFGQVRERAEVTPATPALLAALSRL 126

Query: 1890 YNPVALAAVHGEQARERQAAALAAAPARA 1918
              P A  AV         A  +AAAPA A
Sbjct: 127  AEPGAAEAV-AAPVPAPVADVVAAAPAEA 154