Pairwise Alignments

Query, 768 a.a., twitching motility protein PilJ from Variovorax sp. SCN45

Subject, 539 a.a., chemotaxis protein from Pseudomonas simiae WCS417

 Score =  172 bits (436), Expect = 4e-47
 Identities = 135/471 (28%), Positives = 232/471 (49%), Gaps = 28/471 (5%)

Query: 320 QTRQQLEAILKTYEQMRTQASAILGNLQGLVAAREAQASILTDSEPLRKSLGDLQDKLSA 379
           Q  QQ +  +    Q  T+A A L  L      + A A++ T  E    +   +Q  L  
Sbjct: 74  QDNQQAQEAIGGTRQRITEAFATLEPLLDTAEGKAAYATLKTHREAYVAAFTQVQ-ALIK 132

Query: 380 RTGLGAGTIVLLFVLSLAALALAGAIGFVQVREGRERAAVAERERLAAEQASEEAGR--- 436
           +     G   L   +  A LA+  ++  +   +GR     AERE+ AA+   +EA R   
Sbjct: 133 QGAREQGLAQLKQQVMPAELAVFKSLDALMAMQGR---LFAEREQ-AAQVLYDEARRNMI 188

Query: 437 -------------VNNANQAAILRLMNE-------LQTVAEGDLTQEATVTEDITGAIAD 476
                             ++ I  L  E       L  +A+GDLT    V     G++  
Sbjct: 189 GLFLLCLALVVAAAIIVTRSVIRPLGGEPDEAARVLSHIAQGDLTIVVPVGNSAEGSVMR 248

Query: 477 SVNYTVEELRLLVGNVQNTATRVAQTTSQVESTSTELLAASTEQLREIRETGQSVLTMAE 536
           +++   + L  +V ++  +   VA ++ ++ + S++  ++   Q +EI +   +V  M  
Sbjct: 249 NLHQMQQNLNQMVRHIATSVDGVASSSEELSAVSSQTSSSLQSQGQEIEQAATAVNEMTA 308

Query: 537 RINGVSSQAQESATVARQSLQAASSGLQAVQNAIGGMNSIRDQIQETSKRIKRLGESSQE 596
            ++ V+  A  ++  +R S Q A  G   VQ  +  +N++   + ETS+RI++L    Q+
Sbjct: 309 AVDEVARNAVSTSEASRLSEQTAQRGRAQVQETVASINTLATGVVETSERIQQLAGRVQD 368

Query: 597 IGEITELISDITEQTNVLALNAAIQAASAGEAGRGFSVVAEEVQRLAERSADATRQISAL 656
           I  + E+I  I +QTN+LALNAAI+AA AG+AGRGF+VVA+EV+ LA R+  +T++I  +
Sbjct: 369 ISSVLEVIRSIADQTNLLALNAAIEAARAGDAGRGFAVVADEVRALAHRTQASTQEIEQM 428

Query: 657 VKAIQTDTQDAVGAMERSTQGVVEGAKLSDNAGTALSEIDRVSRRLADLIEQISQSASRE 716
           +  I+ DT+ AV AM  S++ V     ++  +G AL EI R   ++ +    I+ +   +
Sbjct: 429 IGNIRQDTEHAVAAMHSSSERVQATLSVAQRSGEALDEITRSISQINERNMMIASATEEQ 488

Query: 717 ADSANVVAANIQHIFAVTEQTGEGTRTTAQQVRELSQMAEELRRSVARFKI 767
           A  A  V  N+  I  +++Q  +G   T     +L+ MA  L ++VARFK+
Sbjct: 489 ALVAREVDRNLVGIRNLSQQVLQGALHTETAGHDLAGMAGALHQTVARFKV 539