Pairwise Alignments

Query, 768 a.a., twitching motility protein PilJ from Variovorax sp. SCN45

Subject, 540 a.a., chemotaxis protein from Pseudomonas simiae WCS417

 Score =  166 bits (420), Expect = 3e-45
 Identities = 106/330 (32%), Positives = 178/330 (53%), Gaps = 13/330 (3%)

Query: 445 ILRLMNELQTVAEGDLTQEATVTEDITGAIADSVNYTVEELRLLVGNVQNTATRVAQTTS 504
           I + +   Q +A+GDLTQ A +TE       D     +  L  + G +++T   +A  + 
Sbjct: 217 IAQAVQSAQRIAQGDLTQ-AIITER-----TDEAGQLLMALSDMQGGLKSTLVEIANASD 270

Query: 505 QVESTSTELLAASTEQLR-------EIRETGQSVLTMAERINGVSSQAQESATVARQSLQ 557
           Q+ S + EL A + E  R       EI++   +V  M   ++ V+S A  ++  +RQ+  
Sbjct: 271 QLASAAEELSAVTDESSRGLTRQNDEIQQAATAVNQMTAAVDEVASNAVSTSEASRQATT 330

Query: 558 AASSGLQAVQNAIGGMNSIRDQIQETSKRIKRLGESSQEIGEITELISDITEQTNVLALN 617
            A  G Q V+ A+ GM+S+  +I ++++ +  L    +EIG++ ++I  I +QTN+LALN
Sbjct: 331 EAEDGRQQVEQAVSGMSSMVVEINDSTQSVADLAGQVREIGKVIDVIRGIADQTNLLALN 390

Query: 618 AAIQAASAGEAGRGFSVVAEEVQRLAERSADATRQISALVKAIQTDTQDAVGAMERSTQG 677
           AAI+AA AGE GRGF+VVA+EV+ LA R+  +T  I  ++  +QT   DAV AM +S   
Sbjct: 391 AAIEAARAGEQGRGFAVVADEVRALAHRTQISTVDIEKMIGDVQTGADDAVAAMNKSLTW 450

Query: 678 VVEGAKLSDNAGTALSEIDRVSRRLADLIEQISQSASREADSANVVAANIQHIFAVTEQT 737
                 L+ NAG AL  I     ++ +    I+ ++  +A  A  V  N+ +I  ++ QT
Sbjct: 451 ANNTQTLAQNAGEALQRITASVAKINERNLVIASASEEQAQVAREVDRNLLNIQDLSTQT 510

Query: 738 GEGTRTTAQQVRELSQMAEELRRSVARFKI 767
             G   T    ++LS++A      V++F++
Sbjct: 511 AAGAHQTNASSQDLSRLATSFNVLVSKFQL 540