Pairwise Alignments

Query, 121 a.a., twitching motility protein PilH from Variovorax sp. SCN45

Subject, 1155 a.a., Sensor histidine kinase/response regulator from Pseudomonas putida KT2440

 Score = 87.0 bits (214), Expect = 7e-22
 Identities = 45/115 (39%), Positives = 69/115 (60%), Gaps = 1/115 (0%)

Query: 4    RKILVVDDSKTELVFLTDLLQKNGFAVKTAENADDAMRRLEEEHP-DLILMDVVMPGQNG 62
            RK+L+VDD    +  LT  L+  G  V+   N  +A+ RLE+    DL+LMDV+MP  +G
Sbjct: 1031 RKVLLVDDDVRNIFALTSALEHKGAIVEIGRNGREAIERLEQHDDIDLVLMDVMMPEMDG 1090

Query: 63   FQLTRAIARDPKYASIPIILCTSKNQETDRVWGMRQGARDYIVKPVNAADLMSKI 117
            F+ TR I + P++  +PII  T+K  + D+   ++ GA DY+ KP++   L S I
Sbjct: 1091 FEATRLIRQQPRWRKLPIIAVTAKAMKDDQQRCLQAGANDYLAKPIDLDRLFSLI 1145



 Score = 48.5 bits (114), Expect = 3e-10
 Identities = 33/118 (27%), Positives = 54/118 (45%), Gaps = 5/118 (4%)

Query: 4   RKILVVDDSKTELVFLTDLLQKNGFAVKTAENADDAMRRLEEEHPDLILMDVVMPGQNGF 63
           R ILV++D       L DL  + G++   A  AD+      +  PD IL+D+ +P  +G 
Sbjct: 763 RCILVIEDEPNFARILFDLAHELGYSCLVAHGADEGFELAAQYIPDAILLDMRLPDHSGL 822

Query: 64  QLTRAIARDPKYASIPIILCTSKNQETDRV-WGMRQGARDYIVKPVNAADLMSKISAL 120
            + + +        IP+ + + +    DRV   M  GA  Y VKP +  +L    + L
Sbjct: 823 TVLQRLKEQASTRHIPVHIISVE----DRVEAAMHMGAVGYAVKPTSREELKEVFARL 876



 Score = 38.1 bits (87), Expect = 3e-07
 Identities = 22/104 (21%), Positives = 50/104 (48%)

Query: 3   IRKILVVDDSKTELVFLTDLLQKNGFAVKTAENADDAMRRLEEEHPDLILMDVVMPGQNG 62
           ++ IL+V+D   +   +  L+  +   +     A DA+  L +   D +++D+ +P   G
Sbjct: 884 LKHILLVEDDDLQRESIARLIGDDDVEITAVAMAQDALALLRQNIYDCMIIDLKLPDMLG 943

Query: 63  FQLTRAIARDPKYASIPIILCTSKNQETDRVWGMRQGARDYIVK 106
            +L + +  +   A  P+I+ T +N   +    + + +R  I+K
Sbjct: 944 NELLKRMTAEDIRAFPPVIVYTGRNLTREEEADLLKYSRSIIIK 987