Pairwise Alignments

Query, 353 a.a., tRNA-dihydrouridine synthase DusB from Variovorax sp. SCN45

Subject, 281 a.a., tRNA dihydrouridine synthase B (EC 1.-.-.-) from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  287 bits (734), Expect = 3e-82
 Identities = 151/284 (53%), Positives = 192/284 (67%), Gaps = 3/284 (1%)

Query: 43  MVTSRKELWGTLKTSRRANHDGEPGPIAVQIAGTDADMMAEATVYNIERGAQIIDINMGC 102
           M++S  ++W + K+  R  H  EPG   VQIAG+D   MA+A   N+E GAQIIDINMGC
Sbjct: 1   MMSSNPQVWESDKSRLRMVHVDEPGIRTVQIAGSDPVEMADAARINVESGAQIIDINMGC 60

Query: 103 PAKKVCNKWAGSALMRDEPLALEIVQAVVDAARPFNVPVTLKMRTGWSHDHRNAVKLARD 162
           PAKKV  K AGSAL++   L   I+  VV+A    +VPVTLK+RTGW+ +HRN V++A+ 
Sbjct: 61  PAKKVNRKLAGSALLQYPDLVKSILIGVVNAV---DVPVTLKIRTGWAPEHRNCVEIAQL 117

Query: 163 FESAGVQMLTVHGRTREQGYKGHAEYDTIAAVKAAVRVPVVANGDIRSPEKARDVLAATG 222
            E  G+Q LT+HGRTR   + G AEYD+I AVK  V +P++ANGDI +P KAR VL  TG
Sbjct: 118 AEDCGIQALTIHGRTRACLFNGEAEYDSIRAVKQKVSIPIIANGDITNPHKARAVLDYTG 177

Query: 223 ADAVMIGRAAQGRPWIFREIAHFLETGTHRAPPLVAEVRRLLLDHLVEHYALYGDYSGVR 282
           ADA+MIGRAAQGRPWIFREI H+L+TG    P  +AEV+RLL  H+ E +  YG   G R
Sbjct: 178 ADALMIGRAAQGRPWIFREIQHYLDTGELLPPLPLAEVKRLLCTHVRELHDFYGQAKGYR 237

Query: 283 TARKHIGWYVRTLPEGEAFRARMNTIEDCGEQLRAVGDYFDGLA 326
            ARKH+ WY++     + FR   N IED  EQL A+  YF+  A
Sbjct: 238 IARKHVSWYLQEHAPDDQFRRTFNAIEDASEQLEALEAYFENFA 281