Pairwise Alignments

Query, 353 a.a., tRNA-dihydrouridine synthase DusB from Variovorax sp. SCN45

Subject, 338 a.a., nitrogen regulation protein from Agrobacterium fabrum C58

 Score =  257 bits (657), Expect = 3e-73
 Identities = 146/317 (46%), Positives = 199/317 (62%), Gaps = 25/317 (7%)

Query: 5   IGTHTLENRLFVAPMAGVTDRPFRMLCRALGAGYAVSEMVTSRK------ELWGTLKTSR 58
           IG+ T+ NR  +APM+GVTD PFR L    GAG  V+EMV SR+      E W  LK + 
Sbjct: 17  IGSVTIRNRAVLAPMSGVTDLPFRQLAWRYGAGLVVTEMVASRELVANRGESWARLKNAG 76

Query: 59  RANHDGEPGPIAVQIAGTDADMMAEATVYNIERGAQIIDINMGCPAKKVCNKWAGSALMR 118
              H        VQ+AG +A  MAEA     + GA IIDINMGCPAKKV   ++GSALMR
Sbjct: 77  MVPH-------MVQLAGREAHFMAEAAKIAADNGAGIIDINMGCPAKKVTGGYSGSALMR 129

Query: 119 DEPLALEIVQAVVDAARPFNVPVTLKMRTGWSHDHRNAVKLARDFESAGVQMLTVHGRTR 178
           D   AL +++A V A    +VPVTLKMR GW  +  NA ++AR  E+AGVQ++T+HGRTR
Sbjct: 130 DPDHALSLIEATVGAV---DVPVTLKMRLGWDENSINAPEIARRAEAAGVQLITIHGRTR 186

Query: 179 EQGYKGHAEYDTIAAVKAAVRVPVVANGDIRSPEKARDVLAATGADAVMIGRAAQGRPWI 238
            Q Y+G A++D I AV+  + VP++ANGD+ + E AR++L  +GADAVM+GR AQG+PW+
Sbjct: 187 MQFYEGRADWDAIRAVREVISVPLIANGDVETAEDAREILRRSGADAVMVGRGAQGQPWL 246

Query: 239 FREIAHFLETGTHRAPPLVAEVRRLLLDHLVEHYALYGDYSGVRTARKHIGWYV-RTLPE 297
              +A       H AP   A++  + ++H       YG  +G+R ARKH+GWY+ R+ P+
Sbjct: 247 PAVLA------GHSAPQR-ADIPTIAVEHYEMMLEFYGREAGLRHARKHLGWYLDRSAPD 299

Query: 298 -GEAFRARMNTIEDCGE 313
                +A++ T  D GE
Sbjct: 300 IATPEKAQIMTSRDTGE 316