Pairwise Alignments

Query, 542 a.a., Ribose ABC transporter, ATP-binding protein RbsA (TC 3.A.1.2.1) from Variovorax sp. SCN45

Subject, 502 a.a., ribonucleotide-diphosphate reductase subunit alpha from Pseudomonas simiae WCS417

 Score =  327 bits (837), Expect = 9e-94
 Identities = 202/501 (40%), Positives = 293/501 (58%), Gaps = 18/501 (3%)

Query: 9   VLSLSTMGKDY-AAPVLDDVSLVLNAGEVLALTGENGAGKSTLSKIVCGLVQPTRGQMLL 67
           +L L  + K Y     L  ++L +  GE+ AL GENGAGKSTL KI+ G+     GQ+L+
Sbjct: 4   LLKLENICKRYPGVQALKSINLQVERGEIHALLGENGAGKSTLMKILGGVEHQDEGQILI 63

Query: 68  DGQPFAPGSRRDAERLGVRMVMQELGLVTTLSVAENLLL-DRLPSKTGWIRRGKLNELAA 126
           DGQ     + RDA   G+ +V QE  L+  L+  EN+ L   L ++ G +R+ ++ E + 
Sbjct: 64  DGQAQQFATYRDAIAAGIGIVFQEFSLIPYLTAVENIFLGHELSNRFGLLRKREMVEASE 123

Query: 127 RQLAKIGMQNIDPATPVARLGIGQQQMVEIARNLQDDTRVLVLDEPTAMLTPRETSHLFE 186
               ++G+  ID    V  L + +QQ VEIA+ L  D R+LVLDEPTA LTP E   LFE
Sbjct: 124 ALFKRLGV-TIDLQCAVKHLSVAEQQFVEIAKALALDARLLVLDEPTATLTPSEAELLFE 182

Query: 187 QIELLKARGVAIVYVSHRLEELQRIADRVAVLRDGRLVDVRAMAGVRESELVQRMVGRAV 246
            +  LK +GVA++++SH LEE+ ++ DR++VLRDG  V V  +A      LV+ MVGR +
Sbjct: 183 IMRELKRQGVAVIFISHHLEEIFQVCDRISVLRDGGNVGVTDVADSDIDHLVEMMVGRRL 242

Query: 247 H-EHEGRERRTAGPVLLSARGIGRAQVVRDVD---IDLRAGEVMGLAGLVGSGRTELVRL 302
                 +  R  GP+LL  + I   Q+VR+       L  GE++G AGLVGSGRTEL   
Sbjct: 243 ACSFPPKPTRERGPLLLEVKDI---QLVRNGPHNRFQLHKGEILGFAGLVGSGRTELALG 299

Query: 303 LFGADRADRGEITLYENDQPVQQARKGWRSPMQAIRAGIGLVTEDRKSQGLLLTQSIRVN 362
           + GA       +     D  ++  +     P QA+  GIGL+ E RKS+GL+   SIR N
Sbjct: 300 MMGA-------LPSVSKDVWLRGEKITLDDPAQALAHGIGLLPESRKSEGLITDFSIREN 352

Query: 363 ATLSDLGAISRA-GWLQRAKERGIAQKLVELLRIRSRSIEQPVATLSGGNQQKVVFARWL 421
            +L++L     A G + + +E    + L++ L I++ S E  V  LSGGNQQKVV ARW+
Sbjct: 353 ISLNNLPKYQNASGLIDKNRECASVEGLMKQLSIKAPSSESRVFNLSGGNQQKVVIARWI 412

Query: 422 HRECKVLLLDEPTRGVDVGARADLYAELDRMTDAGKALLMVSSDLRELMAMCDRIGVMSA 481
           +  C VL+ DEPTRG+DVGA+A +YA +  +T+ G A++M+SS+L E++ MCDR+ V   
Sbjct: 413 NHHCDVLVFDEPTRGIDVGAKAQIYALMRSLTEQGYAIIMISSELPEIIGMCDRVAVFHK 472

Query: 482 GRLVAVFERGEWTEQSLLAAA 502
           G +V + E      Q ++  A
Sbjct: 473 GAIVKLLEASAVNPQEVMRHA 493



 Score = 77.4 bits (189), Expect = 1e-18
 Identities = 57/219 (26%), Positives = 102/219 (46%), Gaps = 6/219 (2%)

Query: 31  LNAGEVLALTGENGAGKSTLSKIVCGLVQPTRGQMLLDGQPFAPGSRRDAERLGVRMVMQ 90
           L+ GE+L   G  G+G++ L+  + G +      + L G+         A   G+ ++ +
Sbjct: 277 LHKGEILGFAGLVGSGRTELALGMMGALPSVSKDVWLRGEKITLDDPAQALAHGIGLLPE 336

Query: 91  EL---GLVTTLSVAENLLLDRLP---SKTGWIRRGKLNELAARQLAKIGMQNIDPATPVA 144
                GL+T  S+ EN+ L+ LP   + +G I + +        + ++ ++     + V 
Sbjct: 337 SRKSEGLITDFSIRENISLNNLPKYQNASGLIDKNRECASVEGLMKQLSIKAPSSESRVF 396

Query: 145 RLGIGQQQMVEIARNLQDDTRVLVLDEPTAMLTPRETSHLFEQIELLKARGVAIVYVSHR 204
            L  G QQ V IAR +     VLV DEPT  +     + ++  +  L  +G AI+ +S  
Sbjct: 397 NLSGGNQQKVVIARWINHHCDVLVFDEPTRGIDVGAKAQIYALMRSLTEQGYAIIMISSE 456

Query: 205 LEELQRIADRVAVLRDGRLVDVRAMAGVRESELVQRMVG 243
           L E+  + DRVAV   G +V +   + V   E+++   G
Sbjct: 457 LPEIIGMCDRVAVFHKGAIVKLLEASAVNPQEVMRHATG 495