Pairwise Alignments

Query, 542 a.a., Ribose ABC transporter, ATP-binding protein RbsA (TC 3.A.1.2.1) from Variovorax sp. SCN45

Subject, 495 a.a., xylitol ABC transporter, ATPase component (from data) from Pseudomonas simiae WCS417

 Score =  325 bits (832), Expect = 3e-93
 Identities = 195/496 (39%), Positives = 279/496 (56%), Gaps = 9/496 (1%)

Query: 9   VLSLSTMGKDYAA-PVLDDVSLVLNAGEVLALTGENGAGKSTLSKIVCGLVQPTRGQMLL 67
           +L    + K YA  P L D  L L AG V AL G NGAGKST   I+ G+ Q   G +LL
Sbjct: 6   LLQAEHVAKAYAGVPALRDGRLSLRAGSVHALCGGNGAGKSTFLSILMGITQRDAGSILL 65

Query: 68  DGQPFAPGSRRDAERLGVRMVMQELGLVTTLSVAENLLLDRLPSKTGWIRRGKLNELAAR 127
           +G P       +A   G+ M+ QEL  +  ++VAEN+ L R P + G I   K      R
Sbjct: 66  NGAPVQFNRPSEALAAGIAMITQELEPIPYMTVAENIWLGREPRRAGCIVDNKALNRRTR 125

Query: 128 QLAKIGMQNIDPATPVARLGIGQQQMVEIARNLQDDTRVLVLDEPTAMLTPRETSHLFEQ 187
           +L      ++D  +P+ RL + Q Q+VEIA+    D +V+++DEPT+ +   E   LF+ 
Sbjct: 126 ELLDSLEFDVDATSPMHRLSVAQIQLVEIAKAFSHDCQVMIMDEPTSAIGEHEAQTLFKA 185

Query: 188 IELLKARGVAIVYVSHRLEELQRIADRVAVLRDGRLVDVRAMAGVRESELVQRMVGRAVH 247
           I  L A+G  IVYVSHRL EL +IAD  ++ RDG  V+   MA +    LV+ +VG+ + 
Sbjct: 186 IRRLTAQGAGIVYVSHRLSELAQIADDYSIFRDGAFVESGRMADIDRDHLVRGIVGQELT 245

Query: 248 EHEGR-ERRTAGPVLLSARGIGRAQVVRDVDIDLRAGEVMGLAGLVGSGRTELVRLLFGA 306
             + +  R  A    L    + RA    D+ + LR GE++G+ GL+GSGR+E +  ++G 
Sbjct: 246 RIDHKVGRECAANTCLQVDNLSRAGEFHDISLQLRQGEILGIYGLMGSGRSEFLNCIYGL 305

Query: 307 DRADRGEITLYENDQPVQQARKGWRSPMQAIRAGIGLVTEDRKSQGLLLTQSIRVNATLS 366
             AD G +TL     P+         P   I AG+ LVTEDRK  GL+LT SI  N  LS
Sbjct: 306 TVADSGSVTLQGKPMPI-------GLPKATINAGMSLVTEDRKDSGLVLTGSILSNIALS 358

Query: 367 DLGAISRAGWLQRAKERGIAQKLVELLRIRSRSIEQPVATLSGGNQQKVVFARWLHRECK 426
               +S    +   KE  +A+ +V+ L+I++ S+E PVA++SGGNQQKVV A+ L  E  
Sbjct: 359 AYKRLSSWSLINARKETQLAEDMVKRLQIKTTSLELPVASMSGGNQQKVVLAKCLSTEPV 418

Query: 427 VLLLDEPTRGVDVGARADLYAELDRMTDAGKALLMVSSDLRELMAMCDRIGVMSAGRLVA 486
            LL DEPTRG+D GA+ ++Y  LD+    G A ++VSS+  EL+ + DRI V   GRLV 
Sbjct: 419 CLLCDEPTRGIDEGAKQEIYHLLDQFVRGGGAAIVVSSEAPELLHLSDRIAVFKGGRLVT 478

Query: 487 VFERGEWTEQSLLAAA 502
           +      ++++LL  A
Sbjct: 479 ISTDTALSQEALLRLA 494