Pairwise Alignments

Query, 542 a.a., Ribose ABC transporter, ATP-binding protein RbsA (TC 3.A.1.2.1) from Variovorax sp. SCN45

Subject, 516 a.a., ABC transporter, ATP-binding protein (cluster 2, ribose/xylose/arabinose/galactose) / ABC transporter, ATP-binding protein (cluster 2, ribose/xylose/arabinose/galactose) from Variovorax sp. SCN45

 Score =  343 bits (880), Expect = 9e-99
 Identities = 208/513 (40%), Positives = 312/513 (60%), Gaps = 17/513 (3%)

Query: 6   AQPVLSLSTMGKDYAA-PVLDDVSLVLNAGEVLALTGENGAGKSTLSKIVCGLVQPTRGQ 64
           A P+L + ++ K + A  VL DVSL   AG+V A+ GENGAGKSTL K++ G+  P  G+
Sbjct: 14  AAPLLEMRSIRKVFGAVTVLRDVSLQCRAGQVHAICGENGAGKSTLMKVLGGIHAPDGGE 73

Query: 65  MLLDGQPFAPGSRRDAERLGVRMVMQELGLVTTLSVAENLLLDRLPSKTGWIRRGKLNEL 124
           + + G+P   G    A + G+ ++ QEL L+   +VA+N+ L   PS+ G I R  +N  
Sbjct: 74  IRIGGRPVRFGHPSAARQAGIAIIHQELALLPHRTVAQNIFLGHEPSRWGVIDRKAMNAG 133

Query: 125 AARQLAKIGMQNIDPATPVARLGIGQQQMVEIARNLQDDTRVLVLDEPTAMLTPRETSHL 184
           A   L ++G + IDP T   RL + +QQMVEIA+ +  D R+LVLDEPTA L   E+  L
Sbjct: 134 AEAALRRVGCR-IDPRTECGRLSVAEQQMVEIAKAVSLDARILVLDEPTAALDDVESRKL 192

Query: 185 FEQIELLKARGVAIVYVSHRLEELQRIADRVAVLRDGRLVDVRAMAGVRESELVQRMVGR 244
           F+ I  L+  GVA++Y+SHR+ E+  +AD ++V++DG+L+     A      +V+ MVGR
Sbjct: 193 FDLIAELRRAGVAMLYISHRMAEVMALADDISVIKDGQLMATLPAAEATVERIVRLMVGR 252

Query: 245 AVHEHEGRERRTAGPVLLSARGIGRAQVVRDVDIDLRAGEVMGLAGLVGSGRTELVRLLF 304
            + +             + A   G  +V+  +D+ L AGE++G+AGL  SG+ EL R LF
Sbjct: 253 ELSDFYPPAAANPPGAEVFAVEQGGNEVLHGIDLRLHAGEIVGVAGLEASGKVELARALF 312

Query: 305 GADRADRGEITLYENDQPVQQARKGWRSPMQAIRAGIGLVTEDRKSQGLLLTQSIRVNAT 364
           G  R  RG +  +++       +   RSP +A R GIG + +DRK +GL L QS+R NA 
Sbjct: 313 GERRFTRGTVRAWDD-------KGAARSPREAARRGIGYLPDDRKREGLGLQQSLRDNAA 365

Query: 365 LSDLGAISR--AGWLQRAKERGIAQKLVELLRIRSRSIEQPVATLSGGNQQKVVFARWLH 422
           L+ L A++   AG    A+ R +   L+  + +R+   + PV  LSGGNQQKV+ ARW+ 
Sbjct: 366 LT-LRALAGPLAGAGSAARSRSLIDALLNKVEVRAADFDMPVGALSGGNQQKVMVARWMA 424

Query: 423 RECKVLLLDEPTRGVDVGARADLYAELDRMTDAGKALLMVSSDLRELMAMCDRIGVMSAG 482
           RE ++ ++ EPTRG+DVGA+A +Y  L    DAG A+L+VSSD+ E++ +CDRI VM+ G
Sbjct: 425 REPRLWVICEPTRGIDVGAKATIYRLLRAYADAGGAVLVVSSDVAEIIGLCDRICVMALG 484

Query: 483 RLVAVFERGEWTEQSLLAAA----FSDATGRAA 511
           R+VA   RG  +E++++A A     ++A G AA
Sbjct: 485 RIVAHLPRGA-SEEAVIAQAVRHDVAEAEGAAA 516