Pairwise Alignments

Query, 542 a.a., Ribose ABC transporter, ATP-binding protein RbsA (TC 3.A.1.2.1) from Variovorax sp. SCN45

Subject, 515 a.a., ABC transporter, ATP-binding protein (cluster 2, ribose/xylose/arabinose/galactose) / ABC transporter, ATP-binding protein (cluster 2, ribose/xylose/arabinose/galactose) from Variovorax sp. SCN45

 Score =  339 bits (869), Expect = 2e-97
 Identities = 208/492 (42%), Positives = 289/492 (58%), Gaps = 10/492 (2%)

Query: 23  VLDDVSLVLNAGEVLALTGENGAGKSTLSKIVCGLVQPTRGQMLLDGQPFAPGSRRDAER 82
           VL  VS  L  G V  L GENGAGKSTL KI+ G  Q T G + ++GQP   GS RDAE 
Sbjct: 29  VLHGVSFALAPGRVYGLLGENGAGKSTLMKILAGYEQLTGGTLRINGQPQQFGSSRDAEA 88

Query: 83  LGVRMVMQELGLVTTLSVAENLLLDRLPSKTGWIRRGKLNEL-AARQLAKIGMQNIDPAT 141
           LG+ ++ QE  L   LSVA+N+ L     K GW+      E  AA  L+ +G+ NIDP T
Sbjct: 89  LGIVLIHQEFNLAEDLSVAQNIFLGH-EKKKGWLLDDAAMEREAAAALSAVGL-NIDPRT 146

Query: 142 PVARLGIGQQQMVEIARNLQDDTRVLVLDEPTAMLTPRETSHLFEQIELLKARGVAIVYV 201
            V +L + ++Q+VEIA+ +    R+LV+DEPTA LTP ET  LF+ I  L+A GV IVY+
Sbjct: 147 KVRKLIVAEKQLVEIAKAIARRARLLVMDEPTATLTPGETERLFKLIAQLRADGVTIVYI 206

Query: 202 SHRLEELQRIADRVAVLRDGRLVDVRAMAGVRESELVQRMVGRAVHE-HEGRERRTAGPV 260
           SH+L+E++++ D V V+RDGR V       V   ++   MVGR + + +  R+   A   
Sbjct: 207 SHKLDEVEQVTDEVIVMRDGRFVARAPTPEVTRQQMANLMVGRELADLYPPRDVVVAADA 266

Query: 261 -LLSARGIGRAQVVRDVDIDLRAGEVMGLAGLVGSGRTELVRLLFGADRADRGEITLYEN 319
             +  R        +D   ++R GE++G AGLVG+GRTEL   L G  R   G + +   
Sbjct: 267 PAMRVRDFNVPGWAQDASFEVRPGEILGFAGLVGAGRTELFEGLLGL-RPASGNVEMLGK 325

Query: 320 DQPVQQARKGWRSPMQAIRAGIGLVTEDRKSQGLLLTQSIRVNATLSDLGAISRAGWLQR 379
             P     KGWR+P  A + G+  ++EDRK +GL +   +R N TL  L   ++  WL+ 
Sbjct: 326 PVP---GGKGWRNPRDAAKHGLTYLSEDRKGKGLHVNFGLRQNLTLMALERYAQP-WLRP 381

Query: 380 AKERGIAQKLVELLRIRSRSIEQPVATLSGGNQQKVVFARWLHRECKVLLLDEPTRGVDV 439
             ERG     V+   IR+ S+E   ++LSGGNQQK+  A+ L    KV++LDEPTRGVDV
Sbjct: 382 EAERGALAGAVKEYGIRTGSLEVKASSLSGGNQQKLALAKVLQPRPKVVVLDEPTRGVDV 441

Query: 440 GARADLYAELDRMTDAGKALLMVSSDLRELMAMCDRIGVMSAGRLVAVFERGEWTEQSLL 499
           GA+ D+Y  + R+   G A+++VSS+L EL+ +C R+ VM AGRLVA  +    TE+ L+
Sbjct: 442 GAKRDIYFLIQRLAREGLAVIVVSSELMELIGLCHRVAVMRAGRLVATLDADHLTEEELI 501

Query: 500 AAAFSDATGRAA 511
           A A   A   AA
Sbjct: 502 AHATGTADTTAA 513