Pairwise Alignments

Query, 542 a.a., Ribose ABC transporter, ATP-binding protein RbsA (TC 3.A.1.2.1) from Variovorax sp. SCN45

Subject, 512 a.a., ribose ABC transporter - ATP-binding subunit from Pseudomonas putida KT2440

 Score =  330 bits (845), Expect = 1e-94
 Identities = 201/496 (40%), Positives = 276/496 (55%), Gaps = 8/496 (1%)

Query: 8   PVLSLSTMGKDYAAP-VLDDVSLVLNAGEVLALTGENGAGKSTLSKIVCGLVQPTRGQML 66
           PVL L  + K + A   LD  SL + AG V  L GENGAGKSTL K++ G+ +P  G +L
Sbjct: 4   PVLELRGIVKTFGATRALDGASLRVAAGSVHGLVGENGAGKSTLIKVLAGIHRPDAGSLL 63

Query: 67  LDGQPFAPGSRRDAERLGVRMVMQELGLVTTLSVAENLLLDRLPSKTGWIRRGKLNELAA 126
           LDGQP    S R  ERLG+  + QE  L    +V E L           + R      AA
Sbjct: 64  LDGQPHGHFSPRQVERLGIGFIHQERLLPARFTVGEALFFGHERRFGPLLDRRSQQREAA 123

Query: 127 RQLAKIGMQNIDPATPVARLGIGQQQMVEIARNLQDDTRVLVLDEPTAMLTPRETSHLFE 186
           R L       +     +  L   +QQMV+I R L    RVLV DEP+  L  RE   L  
Sbjct: 124 RLLDDYFGLRLPANALIGELSSAEQQMVQIVRALLIKPRVLVFDEPSVALVQREVERLLR 183

Query: 187 QIELLKARGVAIVYVSHRLEELQRIADRVAVLRDGRLVDVRAMAGVRESELVQRMVGRAV 246
            ++ L+  G+AIVY+SH L+E++ + DRV VLR+GR V   +       ++ + MV R V
Sbjct: 184 IVQRLRDDGLAIVYISHYLQEIEALCDRVTVLRNGRDVAEVSPRNTSLEQITRLMVNREV 243

Query: 247 HEHEGRERRTAGPVLLSARGIGRAQVVRDVDIDLRAGEVMGLAGLVGSGRTELVRLLFGA 306
            E   +    AG +LL  RG+GRA+  + +D+ +R GE++GL GLVGSG  EL+R LFG 
Sbjct: 244 GELYPKVAVPAGALLLDVRGLGRARAYQGIDLQVRRGEIVGLTGLVGSGAKELLRSLFGL 303

Query: 307 DRADRGEITLYENDQPVQQARKGWRSPMQAIRAGIGLVTEDRKSQGLLLTQSIRVNATLS 366
              D GE+ L  + QP+       RSP +A+  G+ L+ E+R+ QG+ L  S++ N TL+
Sbjct: 304 APPDSGEVRL--DGQPLSL-----RSPREAVAQGVALMPEERRRQGVALDLSVQENTTLA 356

Query: 367 DLGAISRAGWLQRAKERGIAQKLVELLRIRSRSIEQPVATLSGGNQQKVVFARWLHRECK 426
            L    R G L  A+ER    +L+E LRI++      V  LSGGNQQKV  A+W  R   
Sbjct: 357 ALSRFVRLGLLSPARERHTTLELIERLRIKAHGAHAKVRQLSGGNQQKVALAKWFARCSS 416

Query: 427 VLLLDEPTRGVDVGARADLYAELDRMTDAGKALLMVSSDLRELMAMCDRIGVMSAGRLVA 486
           + LLDEP+ G+DVGA+ ++Y  +  +   G  +L++SSDL EL+ +CDRI VM  G + A
Sbjct: 417 LYLLDEPSVGIDVGAKVEIYRLIGELVKEGAGVLILSSDLPELIGLCDRIHVMHRGAIAA 476

Query: 487 VFERGEWTEQSLLAAA 502
            F  GE     LLA A
Sbjct: 477 RFAAGEANSDRLLAVA 492