Pairwise Alignments
Query, 542 a.a., Ribose ABC transporter, ATP-binding protein RbsA (TC 3.A.1.2.1) from Variovorax sp. SCN45
Subject, 500 a.a., Ribose ABC transport system, ATP-binding protein RbsA (TC 3.A.1.2.1) from Hydrogenophaga sp. GW460-11-11-14-LB1
Score = 337 bits (865), Expect = 5e-97
Identities = 199/485 (41%), Positives = 285/485 (58%), Gaps = 15/485 (3%)
Query: 23 VLDDVSLVLNAGEVLALTGENGAGKSTLSKIVCGLVQPTRGQMLLDGQPFAPGSRRDAER 82
VL V L G V L GENGAGKSTL KI+ G QP+ G + ++G+ R AE
Sbjct: 22 VLHGVDLAFEPGRVYGLLGENGAGKSTLMKILAGYEQPSEGALQVNGRAVRFDGPRAAEA 81
Query: 83 LGVRMVMQELGLVTTLSVAENLLLDRLPSKTG-WIRRGKLNELAARQLAKIGMQNIDPAT 141
G+ ++ QE L L+VA+N+ L + G W+ + A R L +G+ + P T
Sbjct: 82 EGIVLIHQEFNLAEDLTVAQNIFLGHEKKRHGFWLDDSAMRATARRVLDDVGLAKVHPDT 141
Query: 142 PVARLGIGQQQMVEIARNLQDDTRVLVLDEPTAMLTPRETSHLFEQIELLKARGVAIVYV 201
V L + ++Q+VEIA+ L RVL++DEPTA LTP ET LFE + L+A GV +V++
Sbjct: 142 RVRDLIVAERQLVEIAKALSRHARVLIMDEPTATLTPGETGRLFELVARLQADGVTVVFI 201
Query: 202 SHRLEELQRIADRVAVLRDGRLVDVRAMAGVRESELVQRMVGRAVHE--HEGRERRTAGP 259
SH+L+E++RI + V V+RDGRLV +A A + +++ MVGR + + E P
Sbjct: 202 SHKLDEVERITEEVIVMRDGRLVAQQATATLTRAQMANLMVGRELADLYPPRTEVPADAP 261
Query: 260 VLLSARGIGRAQVVRDVDIDLRAGEVMGLAGLVGSGRTELVRLLFGADRADRGEITLYEN 319
VLLS R + +DV ++RAGEV G AGLVG+GRTEL L G
Sbjct: 262 VLLSVRALSVPGWAQDVSFEVRAGEVFGFAGLVGAGRTELFEGLLGLRE---------RR 312
Query: 320 DQPVQQARKGW--RSPMQAIRAGIGLVTEDRKSQGLLLTQSIRVNATLSDLGAISRAGWL 377
Q VQ A + RSP +A AG+ ++EDRK +GL + +R N TL L +R WL
Sbjct: 313 AQAVQVAGRALLPRSPREAANAGLTYLSEDRKGRGLHVRFGLRENLTLMALQRHARP-WL 371
Query: 378 QRAKERGIAQKLVELLRIRSRSIEQPVATLSGGNQQKVVFARWLHRECKVLLLDEPTRGV 437
Q A E + V IR+ S++ P +LSGGNQQK+ A+ LH + +V++LDEPTRGV
Sbjct: 372 QPASEVAALAQAVREFGIRTGSLDVPAGSLSGGNQQKLALAKVLHPDPRVVVLDEPTRGV 431
Query: 438 DVGARADLYAELDRMTDAGKALLMVSSDLRELMAMCDRIGVMSAGRLVAVFERGEWTEQS 497
D+GA+ D+YA + R+ +G+A++++SS+L EL+ +C R+ VM +GRL A + EQ
Sbjct: 432 DIGAKRDIYALIQRLAASGRAVVVISSELMELIGLCHRVAVMRSGRLQATLSAADLNEQE 491
Query: 498 LLAAA 502
L+A A
Sbjct: 492 LIAHA 496
Score = 95.1 bits (235), Expect = 5e-24
Identities = 69/222 (31%), Positives = 106/222 (47%), Gaps = 4/222 (1%)
Query: 26 DVSLVLNAGEVLALTGENGAGKSTLSKIVCGLVQPTRGQMLLDGQPFAPGSRRDAERLGV 85
DVS + AGEV G GAG++ L + + GL + + + G+ P S R+A G+
Sbjct: 277 DVSFEVRAGEVFGFAGLVGAGRTELFEGLLGLRERRAQAVQVAGRALLPRSPREAANAGL 336
Query: 86 RMVMQEL---GLVTTLSVAENLLLDRLPSKTG-WIRRGKLNELAARQLAKIGMQNIDPAT 141
+ ++ GL + ENL L L W++ A+ + + G++
Sbjct: 337 TYLSEDRKGRGLHVRFGLRENLTLMALQRHARPWLQPASEVAALAQAVREFGIRTGSLDV 396
Query: 142 PVARLGIGQQQMVEIARNLQDDTRVLVLDEPTAMLTPRETSHLFEQIELLKARGVAIVYV 201
P L G QQ + +A+ L D RV+VLDEPT + ++ I+ L A G A+V +
Sbjct: 397 PAGSLSGGNQQKLALAKVLHPDPRVVVLDEPTRGVDIGAKRDIYALIQRLAASGRAVVVI 456
Query: 202 SHRLEELQRIADRVAVLRDGRLVDVRAMAGVRESELVQRMVG 243
S L EL + RVAV+R GRL + A + E EL+ G
Sbjct: 457 SSELMELIGLCHRVAVMRSGRLQATLSAADLNEQELIAHATG 498
Score = 72.4 bits (176), Expect = 4e-17
Identities = 63/232 (27%), Positives = 110/232 (47%), Gaps = 17/232 (7%)
Query: 260 VLLSARGI----GRAQVVRDVDIDLRAGEVMGLAGLVGSGRTELVRLLFGADRADRGEIT 315
V + RGI G QV+ VD+ G V GL G G+G++ L+++L G ++ G
Sbjct: 6 VRIELRGIVKRFGPVQVLHGVDLAFEPGRVYGLLGENGAGKSTLMKILAGYEQPSEG--A 63
Query: 316 LYENDQPVQQARKGWRSPMQAIRAGIGLVTED-RKSQGLLLTQSIRVNATLSDLGAISRA 374
L N + V+ + P A GI L+ ++ ++ L + Q+I + G
Sbjct: 64 LQVNGRAVR-----FDGPRAAEAEGIVLIHQEFNLAEDLTVAQNIFLGHEKKRHGF---- 114
Query: 375 GWLQRAKERGIAQKLVELLRIRSRSIEQPVATLSGGNQQKVVFARWLHRECKVLLLDEPT 434
WL + R A+++++ + + + V L +Q V A+ L R +VL++DEPT
Sbjct: 115 -WLDDSAMRATARRVLDDVGLAKVHPDTRVRDLIVAERQLVEIAKALSRHARVLIMDEPT 173
Query: 435 RGVDVGARADLYAELDRMTDAGKALLMVSSDLRELMAMCDRIGVMSAGRLVA 486
+ G L+ + R+ G ++ +S L E+ + + + VM GRLVA
Sbjct: 174 ATLTPGETGRLFELVARLQADGVTVVFISHKLDEVERITEEVIVMRDGRLVA 225