Pairwise Alignments

Query, 542 a.a., Ribose ABC transporter, ATP-binding protein RbsA (TC 3.A.1.2.1) from Variovorax sp. SCN45

Subject, 520 a.a., sugar ABC transporter ATP-binding protein from Dickeya dianthicola ME23

 Score =  325 bits (833), Expect = 3e-93
 Identities = 199/491 (40%), Positives = 286/491 (58%), Gaps = 25/491 (5%)

Query: 24  LDDVSLVLNAGEVLALTGENGAGKSTLSKIVCGLVQPTRGQMLLDGQPFAPGSRRDAERL 83
           LD V+  +   +V  L GENGAGKST+ K++ G+  P+ GQ+LLDG+P   GS + AER 
Sbjct: 39  LDQVNYRVYRNKVNVLIGENGAGKSTMMKMLAGVETPSSGQILLDGKPVTLGSTQQAERQ 98

Query: 84  GVRMVMQELGLVTTLSVAENLLLDRLPSKTGWIRRGKLNELAARQLAKIGMQ----NIDP 139
           G+ ++ QEL L   ++V +N+ +        + +RG +NE     LAK  ++    +IDP
Sbjct: 99  GISIIFQELNLFPNMTVMDNIFI-----ANEFFQRGVINEKFQYALAKTLLERLELDIDP 153

Query: 140 ATPVARLGIGQQQMVEIARNLQDDTRVLVLDEPTAMLTPRETSHLFEQIELLKARGVAIV 199
            TP+  LGIG QQ+VEIAR L  DTRVL++DEPT+ L+  E   LF  I  LK RGV I+
Sbjct: 154 YTPLGELGIGHQQLVEIARALSKDTRVLIMDEPTSALSQSEVKVLFGVIAQLKRRGVTII 213

Query: 200 YVSHRLEELQRIADRVAVLRDGRLVDVRAMAGVRESELVQRMVGRAVHEHEGRERRTAGP 259
           Y+SHRLEEL  I D + + RDGR +  R +       ++++MVG    +H   +    G 
Sbjct: 214 YISHRLEELMAIGDHITIFRDGRCICEREVRHASVPWIIEQMVGDK-KKHFDYQPAPQGD 272

Query: 260 VLLSARGI-----GRAQVVRDVDIDLRAGEVMGLAGLVGSGRTELVRLLFGADRADRGEI 314
            +L+  G+          + DV   LR GEV+G+ GL+G+GRTEL + L G     +G +
Sbjct: 273 TVLTVAGLTALHQSGGYRLHDVSFSLRKGEVVGIYGLLGAGRTELFKGLIGLMPCRQGSV 332

Query: 315 TLYENDQPVQQARKGWRSPMQAIRAGIGLVTEDRKSQGLLLTQSIRVNATLSDL---GAI 371
            L  ND  +     G+R   Q +  GI LV EDR+ +GL+   S+R N TLS L   G  
Sbjct: 333 QL--NDDCLDGL--GFR---QRLEKGIALVPEDRQGEGLVQLMSVRANMTLSSLSLRGFW 385

Query: 372 SRAGWLQRAKERGIAQKLVELLRIRSRSIEQPVATLSGGNQQKVVFARWLHRECKVLLLD 431
               WL+   E     ++V  L ++    E PV +LSGGNQQKVV  + L    +V+LLD
Sbjct: 386 RAWSWLREPDEARQVDEMVRQLAVKVSDGELPVTSLSGGNQQKVVLGKALMTRPQVVLLD 445

Query: 432 EPTRGVDVGARADLYAELDRMTDAGKALLMVSSDLRELMAMCDRIGVMSAGRLVAVFERG 491
           EPTRG+DVGA+ D+Y  + RM   G +++  SS+L E+MA+ DRI VM+ GR+ A   R 
Sbjct: 446 EPTRGIDVGAKTDVYHLIGRMAQQGLSVMFSSSELDEVMALADRILVMADGRITADLPRS 505

Query: 492 EWTEQSLLAAA 502
           + T + L++A+
Sbjct: 506 QVTREILISAS 516