Pairwise Alignments

Query, 542 a.a., Ribose ABC transporter, ATP-binding protein RbsA (TC 3.A.1.2.1) from Variovorax sp. SCN45

Subject, 502 a.a., ABC-type sugar transport system, ATPase component from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  351 bits (900), Expect = e-101
 Identities = 204/504 (40%), Positives = 314/504 (62%), Gaps = 18/504 (3%)

Query: 9   VLSLSTMGKDYAA-PVLDDVSLVLNAGEVLALTGENGAGKSTLSKIVCGLVQPTRGQMLL 67
           +L++  + K++     LDDVSL L AG V A+ GENGAGKSTL KI+ G+    +G +  
Sbjct: 1   MLTVKNITKEFVGVKALDDVSLELQAGRVTAILGENGAGKSTLMKILSGVYPDYKGTIYY 60

Query: 68  DGQPFAPGSRRDAERLGVRMVMQELGLVTTLSVAENLLLDRLP-SKTGWIRRGKLNELAA 126
           +G P    + RDA+  G+ ++ QEL L+  LS+ EN+ L R P +  G +   K+++ AA
Sbjct: 61  NGDPVKFQNTRDAQEKGINIIHQELNLIPYLSIRENIFLGREPETPMGLLDVAKMHKEAA 120

Query: 127 RQLAKIGMQNIDPATPVARLGIGQQQMVEIARNLQDDTRVLVLDEPTAMLTPRETSHLFE 186
           + L ++ + N+DP TPV++L +GQQQ+VEIA+ L  +++V+++DEPT+ ++ +E   LF 
Sbjct: 121 QLLHRLKL-NVDPETPVSQLKVGQQQLVEIAKALSLESQVIIMDEPTSAISDQEVEILFG 179

Query: 187 QIELLKARGVAIVYVSHRLEELQRIADRVAVLRDGRLVDVRAMAGVRESELVQRMVGRAV 246
            I  L+A G AI Y+SH+L+EL  IADR  VLRDG++++   M G+ E  L+Q+MVGR +
Sbjct: 180 IIRALRAEGKAIAYISHKLDELFAIADRYVVLRDGKMIESGEMEGMTEEALIQKMVGREI 239

Query: 247 HEHEGRERRTAGPVLLSARG-------IGRAQVVRDVDIDLRAGEVMGLAGLVGSGRTEL 299
                   R     +LS +        I    +++D++ +L  GEV+G+ GL+G+GRTEL
Sbjct: 240 VIERSCSGRQFDETVLSVKHLTVKHPKIADKFLLQDINFELGKGEVLGIFGLMGAGRTEL 299

Query: 300 VRLLFGADRADRGEITLYENDQPVQQARKGWRSPMQAIRAGIGLVTEDRKSQGLLLTQSI 359
           +  LFG       EITL       Q+       P +A+ AG+ LV EDRK  GL+L   +
Sbjct: 300 MEALFGVLPHQGAEITLAGKVHEFQK-------PQEAMDAGLALVPEDRKQDGLVLCMDL 352

Query: 360 RVNATLSDLGAISRAGWLQRAKERGIAQKLVELLRIRSRSIEQPVATLSGGNQQKVVFAR 419
             N++L+ + +I   G L   KE+G+AQK +  L+I++ S  Q V  LSGGNQQKVV A+
Sbjct: 353 CTNSSLTVVDSILSGGLLDDKKEKGLAQKYMGELKIKASSHRQLVEKLSGGNQQKVVLAK 412

Query: 420 WLHRECKVLLLDEPTRGVDVGARADLYAELDRMTDAGKALLMVSSDLRELMAMCDRIGVM 479
           WL    KVL+LDEPTRG+D+ A+ ++Y  + ++ + G  L++VSS+L E++A+ DR+ VM
Sbjct: 413 WLATRPKVLMLDEPTRGIDINAKNEIYKLIRQLANEGLGLIVVSSELPEILAVSDRVLVM 472

Query: 480 SAGRLVA-VFERGEWTEQSLLAAA 502
           + GRL A +    + +E  +L AA
Sbjct: 473 AEGRLTANIPIDAQTSEDEILQAA 496