Pairwise Alignments

Query, 542 a.a., Ribose ABC transporter, ATP-binding protein RbsA (TC 3.A.1.2.1) from Variovorax sp. SCN45

Subject, 506 a.a., sugar ABC transporter ATPase from Agrobacterium fabrum C58

 Score =  343 bits (879), Expect = 1e-98
 Identities = 202/501 (40%), Positives = 298/501 (59%), Gaps = 17/501 (3%)

Query: 9   VLSLSTMGKDYAAPV--LDDVSLVLNAGEVLALTGENGAGKSTLSKIVCGLVQPTRGQML 66
           +LS++ + K +  PV  L   +L L  GE+ AL GENGAGKSTL  I+ G++QP  G++L
Sbjct: 5   ILSMTNIHKAFG-PVRALRSAALELQRGEIHALAGENGAGKSTLMHIIDGILQPDGGEIL 63

Query: 67  LDGQPFAPGSRRDAERLGVRMVMQELGLVTTLSVAENLLLDRLPSKTGWIRRGK-LNELA 125
           LDG+P    S   A RLG+  V QE+ L   +SVAEN+ +        W    + L + A
Sbjct: 64  LDGKPVRISSPNAANRLGIGFVHQEIALCPEISVAENMYMSETGQSRSWFMNYRDLEKRA 123

Query: 126 ARQLAKIGMQNIDPATPVARLGIGQQQMVEIARNLQDDTRVLVLDEPTAMLTPRETSHLF 185
           A  L +IG  +IDP      L I QQQ+VEIA+ L  D R+L+LDEPTA LT  E   LF
Sbjct: 124 ATVLREIG--DIDPTHRAGDLSISQQQIVEIAKALTLDCRILILDEPTAALTETEAQTLF 181

Query: 186 EQIELLKARGVAIVYVSHRLEELQRIADRVAVLRDGRLVDVRAMAGVRESELVQRMVGRA 245
           + +  L ARG+AI+Y+SHR+ E+    DR+ V+RDG  +    +A +   E+V  MVGR 
Sbjct: 182 KIMRRLAARGIAIIYISHRMAEIFEHCDRITVMRDGCHIRTENIADISPEEVVNSMVGRV 241

Query: 246 V---HEHEGRERRTAGPVLLSARGIGRAQVVRDVDIDLRAGEVMGLAGLVGSGRTELVRL 302
           +   +  +  +   +  V+LS RG+   + V DVD DLR GE++G AGL+G+GR+E+ R 
Sbjct: 242 LDKLYPPKLADDEKSNEVILSVRGLNEGKRVFDVDFDLRRGEILGFAGLIGAGRSEIARA 301

Query: 303 LFGADRADRGEITLYENDQPVQQARKGWRSPMQAIRAGIGLVTEDRKSQGLLLTQSIRVN 362
           +   +   +GE+ L      ++  R        +IR GI  ++EDRK  GL L  SI  N
Sbjct: 302 VCRLEGKPKGEVVLRGRSLKLRDYR-------DSIREGIVYLSEDRKGDGLFLNMSIATN 354

Query: 363 ATLSDLGAISRA-GWLQRAKERGIAQKLVELLRIRSRSIEQPVATLSGGNQQKVVFARWL 421
            +  D+G IS   G++QR KE   A +L   L++R+ S+   V+TLSGGNQQKV  A+ L
Sbjct: 355 VSALDIGRISNGMGFIQRRKEMKRADELGRRLKLRANSVGDAVSTLSGGNQQKVALAKML 414

Query: 422 HRECKVLLLDEPTRGVDVGARADLYAELDRMTDAGKALLMVSSDLRELMAMCDRIGVMSA 481
             E +V+ LDEPTRGVDVGA+A+++ ++  +   G  ++++SS+L EL+ + DR+ V+  
Sbjct: 415 SVEPEVIFLDEPTRGVDVGAKAEIHRQIRELARQGVGVVVISSELPELIGVSDRVLVVRE 474

Query: 482 GRLVAVFERGEWTEQSLLAAA 502
           GR+    E  + TE+ ++  A
Sbjct: 475 GRITGEVEGDDMTEEKIMQLA 495