Pairwise Alignments

Query, 542 a.a., Ribose ABC transporter, ATP-binding protein RbsA (TC 3.A.1.2.1) from Variovorax sp. SCN45

Subject, 499 a.a., ribose ABC transporter ATPase from Agrobacterium fabrum C58

 Score =  353 bits (905), Expect = e-101
 Identities = 197/479 (41%), Positives = 291/479 (60%), Gaps = 8/479 (1%)

Query: 24  LDDVSLVLNAGEVLALTGENGAGKSTLSKIVCGLVQPTRGQMLLDGQPFAPGSRRDAERL 83
           L +V+  +  G + A+ GENGAGKSTL KI+ G   PT G   + G         DA++L
Sbjct: 23  LSNVNFTVEYGRIHAVVGENGAGKSTLMKILSGSYAPTTGTTEIAGVEVQMRRPADAQKL 82

Query: 84  GVRMVMQELGLVTTLSVAENLLLDRLPSKTGWIRRGKLNELAARQLAKIGMQNIDPATPV 143
           G+RMV QEL LV  L+VAEN+ L R+P +   + R  +   AA  L ++    IDP   +
Sbjct: 83  GIRMVHQELNLVPDLTVAENIYLGRMPHRRFLVDRQAMLRKAAAVLKELEAA-IDPKARL 141

Query: 144 ARLGIGQQQMVEIARNLQDDTRVLVLDEPTAMLTPRETSHLFEQIELLKARGVAIVYVSH 203
             L I QQQ+VEIA++   D R++VLDEPT+ L+  ET+ LF  +  +K++G+AI+Y+SH
Sbjct: 142 GDLPISQQQLVEIAKSYSADPRIIVLDEPTSSLSEHETTALFSILRKMKSQGIAIIYISH 201

Query: 204 RLEELQRIADRVAVLRDGRLVDVRAMAGVRESELVQRMVGRAVHEHEGRERRTAGPVLLS 263
           RL+E+  IAD V +LRDG ++D R  AG+  +E+++ MVGR V     +     GPV   
Sbjct: 202 RLKEVLDIADDVTILRDGSMIDTRPAAGITAAEMIRLMVGREVANVFPKTPSKIGPVAFK 261

Query: 264 ARGIGRAQVVRDVDIDLRAGEVMGLAGLVGSGRTELVRLLFGADRADRGEITLYENDQPV 323
             G+   +   DV  D+R+GE++GL GLVG+GRTE+ + +FG      G I +  N + V
Sbjct: 262 VTGLSDGEKFHDVGFDVRSGEILGLTGLVGAGRTEVAQAIFGLAPLATGRIEI--NGKAV 319

Query: 324 QQARKGWRSPMQAIRAGIGLVTEDRKSQGLLLTQSIRVNATLSDLGAISRAGWLQRAKER 383
                   SP  A++AG+  V EDRK  G++ + S+R N +L  L  +SR G +  +++R
Sbjct: 320 TIG-----SPAAAVKAGVAYVPEDRKGDGIVPSMSVRENISLPVLRRLSRLGRIGMSRDR 374

Query: 384 GIAQKLVELLRIRSRSIEQPVATLSGGNQQKVVFARWLHRECKVLLLDEPTRGVDVGARA 443
           G+A K      I     E+ +  LSGGNQQK + +RWL    KVL+LDEPTRGVDVGA+A
Sbjct: 375 GLAAKYTRDFSIVPPDPERRINLLSGGNQQKAIISRWLAAGPKVLILDEPTRGVDVGAKA 434

Query: 444 DLYAELDRMTDAGKALLMVSSDLRELMAMCDRIGVMSAGRLVAVFERGEWTEQSLLAAA 502
           +++  +  +   G A++M+SS+L E+M +CDR+ VM  GR  +   RG+ TE+ ++A A
Sbjct: 435 EIHRIIGELVAGGMAVVMISSELPEVMGVCDRVVVMRDGRASSPIARGDLTEERIMALA 493



 Score = 99.4 bits (246), Expect = 3e-25
 Identities = 71/223 (31%), Positives = 112/223 (50%), Gaps = 5/223 (2%)

Query: 26  DVSLVLNAGEVLALTGENGAGKSTLSKIVCGLVQPTRGQMLLDGQPFAPGSRRDAERLGV 85
           DV   + +GE+L LTG  GAG++ +++ + GL     G++ ++G+    GS   A + GV
Sbjct: 273 DVGFDVRSGEILGLTGLVGAGRTEVAQAIFGLAPLATGRIEINGKAVTIGSPAAAVKAGV 332

Query: 86  RMVMQEL---GLVTTLSVAENLLLD--RLPSKTGWIRRGKLNELAARQLAKIGMQNIDPA 140
             V ++    G+V ++SV EN+ L   R  S+ G I   +   LAA+      +   DP 
Sbjct: 333 AYVPEDRKGDGIVPSMSVRENISLPVLRRLSRLGRIGMSRDRGLAAKYTRDFSIVPPDPE 392

Query: 141 TPVARLGIGQQQMVEIARNLQDDTRVLVLDEPTAMLTPRETSHLFEQIELLKARGVAIVY 200
             +  L  G QQ   I+R L    +VL+LDEPT  +     + +   I  L A G+A+V 
Sbjct: 393 RRINLLSGGNQQKAIISRWLAAGPKVLILDEPTRGVDVGAKAEIHRIIGELVAGGMAVVM 452

Query: 201 VSHRLEELQRIADRVAVLRDGRLVDVRAMAGVRESELVQRMVG 243
           +S  L E+  + DRV V+RDGR     A   + E  ++    G
Sbjct: 453 ISSELPEVMGVCDRVVVMRDGRASSPIARGDLTEERIMALATG 495