Pairwise Alignments

Query, 542 a.a., Ribose ABC transporter, ATP-binding protein RbsA (TC 3.A.1.2.1) from Variovorax sp. SCN45

Subject, 505 a.a., ABC transporter, nucleotide binding/ATPase protein (ribose) from Agrobacterium fabrum C58

 Score =  371 bits (952), Expect = e-107
 Identities = 212/506 (41%), Positives = 305/506 (60%), Gaps = 13/506 (2%)

Query: 9   VLSLSTMGKDY-AAPVLDDVSLVLNAGEVLALTGENGAGKSTLSKIVCGLVQPTRGQMLL 67
           +L L  + K++     L +V   L +GEV A+ GENGAGKSTL KI+ G+ QP+ G +L 
Sbjct: 9   LLRLENISKEFPGVKALSNVHFDLRSGEVHAVCGENGAGKSTLMKIISGVYQPSEGTILH 68

Query: 68  DGQPFAPGSRRDAERLGVRMVMQELGLVTTLSVAENLLLDRLPSKTGWIRRGKLNELAAR 127
            G+     S   +E  G+ ++ QEL LV  LSVAEN+ L R P +   + R KL   A R
Sbjct: 69  KGEKVQYASPLQSEAAGIAIIHQELNLVPHLSVAENIYLAREPRRGFLVDRKKLRLDAKR 128

Query: 128 QLAKIGMQNIDPATPVARLGIGQQQMVEIARNLQDDTRVLVLDEPTAMLTPRETSHLFEQ 187
            L ++G+ +I+P   V  L + Q QMVEIA+ L  D  VL++DEPT+ LT +ET  LF+ 
Sbjct: 129 CLDRLGV-DINPDQLVRSLSVAQCQMVEIAKALSLDAEVLIMDEPTSSLTEQETRLLFKV 187

Query: 188 IELLKARGVAIVYVSHRLEELQRIADRVAVLRDGRLVDVRAMAGVRESELVQRMVGRAVH 247
           I  LKA GV IVY+SHRL+E+  I DRV +LRDGR +     A +   ++V RMVGR++ 
Sbjct: 188 IRDLKASGVGIVYISHRLDEMAEIVDRVTILRDGRYISTDDFASITVDDIVTRMVGRSLE 247

Query: 248 EH-EGRERRTAGPVLLSARGIGRAQVVRDVDIDLRAGEVMGLAGLVGSGRTELVRLLFGA 306
           +    R  R    +L S  G+ R  V  DV   LR GE++G AGL+G+GRTE+ R +FGA
Sbjct: 248 DKFPERTSRPTDDILFSVEGLTRNGVFSDVSFSLRRGEILGFAGLMGAGRTEVARAIFGA 307

Query: 307 DRADRGEITLYENDQPVQQARKGWRSPMQAIRAGIGLVTEDRKSQGLLLTQSIRVNATLS 366
           D  D G+I     +  +        SP  AI  GI  ++EDRKS GL +  S+  N TL+
Sbjct: 308 DPLDAGKIVFNGRELSIG-------SPQDAIEEGIAYLSEDRKSDGLAIKMSVAANTTLA 360

Query: 367 DLGAIS-RAGWLQRAKERGIAQKLVELLRIRSRSIEQPVATLSGGNQQKVVFARWLHREC 425
           +LG +S R G +   K   +A++ V+LL IR+ SI+Q V  LSGGNQQK++  +WL R+ 
Sbjct: 361 NLGEVSNRFGLIDFKKHDDVAKRYVDLLNIRTPSIDQTVRLLSGGNQQKIIIGKWLFRQS 420

Query: 426 KVLLLDEPTRGVDVGARADLYAELDRMTDAGKALLMVSSDLRELMAMCDRIGVMSAGRLV 485
           +VL  DEPTRG+DVGA+  +Y  +D +   G  ++++SS+L E++ + DRI V   GR+ 
Sbjct: 421 RVLFFDEPTRGIDVGAKFAIYKIMDELAAQGIGVILISSELPEILGLTDRIAVFHQGRIT 480

Query: 486 AVFERGEWTEQSLLAAAFSDATGRAA 511
            V E  +  ++ ++   ++   GRAA
Sbjct: 481 GVLETAKTNQEEIM--RYASGYGRAA 504