Pairwise Alignments

Query, 329 a.a., Ribose ABC transporter, permease protein RbsC (TC 3.A.1.2.1) from Variovorax sp. SCN45

Subject, 331 a.a., D-ribose ABC transporter - permease subunit from Pseudomonas putida KT2440

 Score =  400 bits (1027), Expect = e-116
 Identities = 204/308 (66%), Positives = 254/308 (82%)

Query: 20  LGTYLGLTVVLVGMIALFGSLSEYFLTRETFVSIANEIPALAVMAVGMTFVLIIAGIDLS 79
           LGTYLGL   L+ MI LF  LS +F +  TF ++AN+IP L V+AVGMTFVLII GIDLS
Sbjct: 23  LGTYLGLAGALLAMIVLFSFLSSHFWSYGTFSTLANQIPDLMVLAVGMTFVLIIGGIDLS 82

Query: 80  VGSVLALSAAVTAAAILEWKLSVPLAAVLGLATGLICGTVTGAVSVAWRLPSFIVSLGML 139
           VGSVLAL+A+  + AIL W   V  +A+LG+A   + G++TG V+VAWR+PSFIVSLG+L
Sbjct: 83  VGSVLALAASTVSVAILGWGWGVLPSALLGMAVAALAGSITGGVTVAWRIPSFIVSLGVL 142

Query: 140 EAVRGGAYLVTDSRTQYVGDAISGLAAPWIGGISAAFVLAVVLVVIGQMVLTRTVFGRHV 199
           E  RG AY  TDSRT Y+GDA +  + P   G+S AF++A++++V+ Q+VLTRTVFGR++
Sbjct: 143 EMARGLAYQFTDSRTAYIGDAYAWFSNPVAFGVSPAFIIALLVIVLAQLVLTRTVFGRYL 202

Query: 200 VGIGTNEEAMRLAGVDPRPVRIIVFAVTGLLAGLAGLMQSARLEAADPNAGVGIELQVIA 259
           +GIGTNEEA+RLAG+DPRP +++VFA+ GLLAGLA L Q +RLEAADPNAG G+ELQVIA
Sbjct: 203 IGIGTNEEAVRLAGIDPRPYKVLVFALMGLLAGLAALFQISRLEAADPNAGSGLELQVIA 262

Query: 260 AVVIGGTSLMGGRGSVVNTFFGVLIIAVLEAGLAQVGASEPSKRIITGAVIVVAVIIDTL 319
           AVVIGGTSLMGGRGSV++TFFGVLII+VL AGLAQ+GASEP+KRIITGAVIV+AV++DT 
Sbjct: 263 AVVIGGTSLMGGRGSVISTFFGVLIISVLAAGLAQIGASEPTKRIITGAVIVIAVVLDTY 322

Query: 320 RQRRADRR 327
           R RRA RR
Sbjct: 323 RSRRAGRR 330