Pairwise Alignments

Query, 329 a.a., Ribose ABC transporter, permease protein RbsC (TC 3.A.1.2.1) from Variovorax sp. SCN45

Subject, 321 a.a., Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components from Enterobacter asburiae PDN3

 Score =  195 bits (495), Expect = 1e-54
 Identities = 112/299 (37%), Positives = 173/299 (57%), Gaps = 6/299 (2%)

Query: 28  VVLVGMIALFGSLSEYFLTRETFVSIANEIPALAVMAVGMTFVLIIAGIDLSVGSVLALS 87
           + L+ +IA+  ++S  F T     +I  +    A+MAVGMT V++ +GIDLSVGS+LAL+
Sbjct: 24  IALLVLIAIVSTMSPNFFTVNNLFNILQQTSVNAIMAVGMTLVILTSGIDLSVGSLLALT 83

Query: 88  AAVTAAAILEWKLSVPLAAVLGLATGLICGTVTGAVSVAWRLPSFIVSLGMLEAVRGGAY 147
            A+ AA+I+  +++  +A    LA G   G VTG +    R+ +FI +L M+  +RG   
Sbjct: 84  GAI-AASIVGIEVNALVAVAAALAAGAAIGAVTGVIVAKGRVQAFIATLVMMLLLRGVTM 142

Query: 148 LVTDSRTQYVGDAISGLAAPWIG-----GISAAFVLAVVLVVIGQMVLTRTVFGRHVVGI 202
           + T+      G   +     W G     G+     +  ++ +    +L  T  GR++  +
Sbjct: 143 VYTNGSPVNTGFTDNADLFGWFGIGRPLGVPTPVWIMAIVFLAAWYMLHHTRLGRYIYAL 202

Query: 203 GTNEEAMRLAGVDPRPVRIIVFAVTGLLAGLAGLMQSARLEAADPNAGVGIELQVIAAVV 262
           G NE A RL+G+    V+IIV+++ GLLA LAG+++ ARL +A P AG G EL  IAAVV
Sbjct: 203 GGNEAATRLSGISVNKVKIIVYSLCGLLASLAGIIEVARLSSAQPTAGTGYELDAIAAVV 262

Query: 263 IGGTSLMGGRGSVVNTFFGVLIIAVLEAGLAQVGASEPSKRIITGAVIVVAVIIDTLRQ 321
           +GGTSL GG+G +V T  G LI+  L  GL  +G S   + I+   VI++AV++D  +Q
Sbjct: 263 LGGTSLAGGKGRIVGTLIGALILGFLNNGLNLLGVSSYYQMIVKAVVILLAVLVDNKKQ 321