Pairwise Alignments

Query, 365 a.a., Ribose operon repressor from Variovorax sp. SCN45

Subject, 333 a.a., LacI family transcriptional regulator from Pseudomonas simiae WCS417

 Score =  212 bits (539), Expect = 1e-59
 Identities = 124/334 (37%), Positives = 193/334 (57%), Gaps = 8/334 (2%)

Query: 1   MATIKDVALQAEVSVTTVSHVVNDTRHVSAKVRERVELAIRELGYVPNAMARSLKSNTTS 60
           M T+ DVA +A VS +TVSHV+N TR VS      V+ AI+ LGY+PN +ARSL  ++T+
Sbjct: 1   MVTMDDVASRAGVSTSTVSHVLNGTRKVSPATVLAVQQAIQALGYIPNTLARSLARSSTN 60

Query: 61  TLGMLIPNSSNPYFAEIVRIVEDRCFGAGYTLVLCNTDDEPHRQSVYLQVLAERRIDGLI 120
           T+G+ I   SN YF+E V  +E  C   GY ++  +T D+P ++   +  L  RR+DG  
Sbjct: 61  TMGVAISALSNHYFSETVHAIETECAKNGYMMLFVDTHDDPEQELRVVTALHHRRVDG-- 118

Query: 121 VVLTGTGDDDALVKQLHGLRVPTVLVDREIADPACDLVETAHMQGGLLAVRHLLSLGHKR 180
           +VL  +    AL + L    +P VLVDR ++D   D +   + Q     ++HL++ GH+R
Sbjct: 119 IVLAPSNGSKAL-EYLRANEIPAVLVDRMMSD-QFDQIGVDNAQPTQALIQHLIAHGHRR 176

Query: 181 IACIGGQAGVMPSEQRIEGWRMALAEAGATPDIANGDALLWRGGFTSQGGYEAMHAILRT 240
           I  I G+ G   +++R+ G+R AL  AG    +A    LL  GG  ++   +A   +L  
Sbjct: 177 IGFIAGREGFSTTDERVAGYRAALLAAG----LAFDPQLLVNGGSNTEPARKATVQLLGL 232

Query: 241 ERKPSAVFVCNDLMAIGALRAAHESGVRVPDDLSIVGFDDIELSAYTSPPLTTVAQPKER 300
              P+A+   N+LM +GA++A  ++ + VP  +++VGFDD + + +  P LT +AQP + 
Sbjct: 233 AAPPTAIMAGNNLMTLGAMQALRDAQITVPGQMALVGFDDFDWADFFEPRLTLIAQPVQA 292

Query: 301 IGAMAVDMLLEQMGGKRRDARKVVLQPELRVRAS 334
           +GA AV +LL++M         V L P L+VR S
Sbjct: 293 LGAQAVHLLLQRMASPDAPPHSVRLTPTLQVRNS 326