Pairwise Alignments

Query, 365 a.a., Ribose operon repressor from Variovorax sp. SCN45

Subject, 340 a.a., DNA-binding transcriptional repressor from Pseudomonas putida KT2440

 Score =  299 bits (766), Expect = 6e-86
 Identities = 167/336 (49%), Positives = 221/336 (65%), Gaps = 8/336 (2%)

Query: 1   MATIKDVALQAEVSVTTVSHVVNDTRHVSAKVRERVELAIRELGYVPNAMARSLKSNTTS 60
           MATIKDVA  A +S TTVSHV+N TR VS +VR +VE AI EL YVP+A+ARSLK+ +T+
Sbjct: 1   MATIKDVAALAGISYTTVSHVLNKTRPVSEQVRLKVEAAIIELDYVPSAVARSLKARSTA 60

Query: 61  TLGMLIPNSSNPYFAEIVRIVEDRCFGAGYTLVLCNTDDEPHRQSVYLQVLAERRIDGLI 120
           T+G+L+PNS NPYFAE+ R +ED C   GY ++LCN+DD P +Q  YL+VL E+RIDGL+
Sbjct: 61  TIGLLVPNSVNPYFAELARGIEDACERNGYCVILCNSDDNPQKQRSYLRVLLEKRIDGLV 120

Query: 121 VVLTGTGDDDALVKQLHGLRVPTVLVDREIADPACDLVETAHMQGGLLAVRHLLSLGHKR 180
           V     G DD L++ L  +R P V+VDRE+     DLV   H QG  LA RHLL LGH+ 
Sbjct: 121 V--ASVGQDDDLLQSLASVRTPMVIVDRELEGVDADLVRIDHEQGAYLATRHLLELGHRD 178

Query: 181 IACIGGQAGVMPSEQRIEGWRMALAEAGATPDIANGDALLWRGGFTSQGGYEAMHAILRT 240
           +A IGG A    ++ R+ G+R A+AEAGA      G  +L    FTS GG+ A   +L  
Sbjct: 179 VAYIGGPAETGVTQLRLSGFRRAMAEAGAP---VPGSRVL-HCDFTSPGGHAAAAQVLEG 234

Query: 241 ERKPSAVFVCNDLMAIGALRAAHESGVRVPDDLSIVGFDDIELSAYTSPPLTTVAQPKER 300
           +R PSA+F  ND++  G LRAA E  + VP +LS++GFDDIELS Y  P LTTV Q    
Sbjct: 235 KR-PSAIFAGNDMIGFGVLRAAAERNISVPGELSVIGFDDIELSRYVYPSLTTVGQSIRE 293

Query: 301 IGAMAVDMLLEQMGGKRRD-ARKVVLQPELRVRAST 335
           +G  A  +LL ++   R+  A + ++ P + +R ST
Sbjct: 294 LGESAASLLLTRIATPRQGAAEQRIVAPRIVLREST 329