Pairwise Alignments

Query, 365 a.a., Ribose operon repressor from Variovorax sp. SCN45

Subject, 333 a.a., HTH-type transcriptional regulator GalR from Erwinia tracheiphila SCR3

 Score =  168 bits (425), Expect = 2e-46
 Identities = 116/338 (34%), Positives = 176/338 (52%), Gaps = 10/338 (2%)

Query: 1   MATIKDVALQAEVSVTTVSHVVNDTRHVSAKVRERVELAIRELGYVPNAMARSLKSNTTS 60
           M TIKDVA  A VSV TVS V+N +  VS   R+ V+ A+ EL Y PNA AR+L   +T 
Sbjct: 1   MTTIKDVARLAGVSVATVSRVINHSPKVSDISRQAVQTAMEELQYHPNANARALAQQSTE 60

Query: 61  TLGMLIPNSSNPYFAEIVRIVEDRCFGAGYTLVLCNTDDEPHRQSVYLQVLAERRIDGLI 120
           T+G+++ + S+P+F  +V+ VE   +  G+ L++ N      ++   ++ L   R D L+
Sbjct: 61  TMGLVVGDVSDPFFGALVKAVEQVAYETGHFLLIGNGYHTEQKEHQAIEQLIRHRCDALV 120

Query: 121 VVLTGTGDDD--ALVKQLHGLRVPTVLVDREIADPACDLVETAHMQGGLLAVRHLLSLGH 178
           V      D+   +L+ Q+ G+    VL++R +       V      G  LA RHL+  GH
Sbjct: 121 VHAKKIPDEQLLSLMAQIPGM----VLINRSLPGYEQRCVALDDHYGAWLATRHLIQQGH 176

Query: 179 KRIACIGGQAGVMPSEQRIEGWRMALAEAGATPDIANGDALLWRGGFTSQGGYEAMHAIL 238
           + IA I     +  +E+R++G+  AL E     +    D L+  G     GG +AM  +L
Sbjct: 177 QNIAFICSNHPISDAEERLQGYYHALCEHQQPCN----DRLVAYGEPDEVGGEQAMTELL 232

Query: 239 RTERKPSAVFVCNDLMAIGALRAAHESGVRVPDDLSIVGFDDIELSAYTSPPLTTVAQPK 298
              +  SAV   ND MA GAL   +++GVRVP+++S++GFDD+ +S Y  P LTTV  P 
Sbjct: 233 GRGKPFSAVACYNDSMAAGALAVLNDNGVRVPEEMSLIGFDDVLVSRYVRPRLTTVRYPI 292

Query: 299 ERIGAMAVDMLLEQMGGKRRDARKVVLQPELRVRASTA 336
             +   A  + L     + R     +  P L  R S A
Sbjct: 293 VTMAQQAALLALALADNQPRPEVTNLFIPTLVRRHSVA 330