Pairwise Alignments

Query, 365 a.a., Ribose operon repressor from Variovorax sp. SCN45

Subject, 332 a.a., HTH-type transcriptional regulator GalS from Dickeya dadantii 3937

 Score =  177 bits (448), Expect = 5e-49
 Identities = 115/341 (33%), Positives = 184/341 (53%), Gaps = 16/341 (4%)

Query: 1   MATIKDVALQAEVSVTTVSHVVNDTRHVSAKVRERVELAIRELGYVPNAMARSLKSNTTS 60
           M TI+DVA QA VS+ TVS V+N++  V+ + RE V   + +LGY PNA A++L S  + 
Sbjct: 1   MITIRDVARQAGVSIATVSRVLNNSSSVTQQTRELVLQTVEQLGYRPNANAQALASQVSD 60

Query: 61  TLGMLIPNSSNPYFAEIVRIVEDRCFGAGYTLVLCNTDDEPHRQSVYLQVLAERRIDGLI 120
           T+G+++ + S+P+F  +V+ V+         +++ N+  +  ++   ++VL  +R + LI
Sbjct: 61  TIGVVVMDVSDPFFGAMVKAVDTVAQRLQKHVLINNSYHQEEKERHAIEVLIRQRCNALI 120

Query: 121 VVLTGTGDDDA--LVKQLHGLRVPTVLVDREIADPACDLVETAHMQGGLLAVRHLLSLGH 178
           V      D++    + Q+ G+    VL++R + D     V   ++ G ++A R LL  GH
Sbjct: 121 VHAKALSDEELAEFMDQVPGM----VLINRLLPDYPHRCVCLDNVSGAMMATRMLLQQGH 176

Query: 179 KRIACIGGQAGVMPSEQRIEGWRMALAEAGATPD---IANGDALLWRGGFTSQGGYEAMH 235
           +RI  +     +    +R+ GWR AL E G  P    IA+G+  L       QGG  AM 
Sbjct: 177 QRIGYLRSSHPIADVTERLTGWRQALQEQGTEPPDEWIASGEPDL-------QGGEAAMV 229

Query: 236 AILRTERKPSAVFVCNDLMAIGALRAAHESGVRVPDDLSIVGFDDIELSAYTSPPLTTVA 295
            +L   ++ +AVF  ND MA GAL A  ++G+ VP+  S+VGFDDI +S YT P LTT+ 
Sbjct: 230 ELLGRNQQLTAVFAYNDGMAAGALMALKDNGITVPERFSVVGFDDIPISRYTDPRLTTIR 289

Query: 296 QPKERIGAMAVDMLLEQMGGKRRDARKVVLQPELRVRASTA 336
            P   +  +A ++ L+   G      +    P L  R S A
Sbjct: 290 YPIVSMAKIATELALKGAAGLLDPTARHCFMPTLVRRHSVA 330