Pairwise Alignments

Query, 616 a.a., Putative protease from Variovorax sp. SCN45

Subject, 555 a.a., Predicted protease with the C-terminal PDZ domain from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  121 bits (303), Expect = 9e-32
 Identities = 103/398 (25%), Positives = 170/398 (42%), Gaps = 31/398 (7%)

Query: 50  VSLPVWIPGSYLVREFAKNLQGLRATQGRRKPTLTQLDKCSWLVECTPGQPLVLNYQVCA 109
           + LP W PG Y +  +A+ ++  +   G       +  K  W  +        ++Y+  A
Sbjct: 31  LQLPSWRPGRYEITNYAQKIRAFQVNHGTETIHWQKETKDLWTFKSVQAGRYRISYEFHA 90

Query: 110 YDNSVRTAWLDAERGFFNGTSVCLRVEGQTDAPHALEIVAPVLADDAPRWSCATALVPLK 169
                  +W D E+ + N  + C  V+   +AP  +++  P        +  ATAL    
Sbjct: 91  AQMDAGGSWSDDEQLYINFINCCFAVKDFENAPVKVQLNLP------EGFEVATAL---- 140

Query: 170 ADRHGFGSYQAAGYDELADSPVEMGAFWSAEFEACGVPHRFVVAGAAASFDGDRLIADTK 229
             + G   YQA  Y  L DSP+   A            +  +       FD  +LI   +
Sbjct: 141 -PKKGKHLYQATDYQHLVDSPLMASASLKHYSYQVKRSNFHLWFQGEIHFDVPQLIRQFE 199

Query: 230 AICEAEMRFWHGDKAGKRGGPKLPIDRYVFMLNAVD-DGYGGLEHRHSTALICNRRDLPQ 288
           A  E ++     D  G+      P + Y F+   +    Y G+EH+ ST +     D  +
Sbjct: 200 AFTEKQV-----DAFGE-----FPAEDYHFLYQLLPYKHYHGVEHQFSTVITFGPADSLK 249

Query: 289 RGEKKKQPEGYTTLMGLISHEYFHTWNVKRMRPGEFARYDYSQENYTQLLWFFEGFTSYY 348
             EK +  E +    G+  HE +H WNV R+RP     YD+S+E Y       EG T+Y 
Sbjct: 250 --EKSEMDEFF----GVSCHELYHFWNVCRIRPKPLLPYDFSKEVYFDTGIVAEGVTTYM 303

Query: 349 DDLLLRRAGRIDDAAYLRLLNKTINQVMQTPGRLVQPVADASFDAWVKYYRQDEQTPNST 408
            DL L ++G    + +L  + K + +   + G   Q ++ +S+D W+  Y+     P   
Sbjct: 304 GDLFLLKSGYFSLSTFLDNMQKQLAREFGSFGWQNQAISASSWDLWLDGYKAG--IPERK 361

Query: 409 VSYYTKGALVALCFDLTLRHEGKGTLDDVMRHLWTHGG 446
           VS Y +GAL++   DL L  +G  +L  VM+ +W   G
Sbjct: 362 VSIYNRGALISTILDLMLLDQG-SSLHQVMKIMWERFG 398