Pairwise Alignments

Query, 158 a.a., tmRNA-binding protein SmpB from Variovorax sp. SCN45

Subject, 160 a.a., SsrA-binding protein from Pseudomonas putida KT2440

 Score =  176 bits (447), Expect = 1e-49
 Identities = 84/158 (53%), Positives = 114/158 (72%)

Query: 1   MATKKQDTSSRIADNKKAAYNYFFEERFEAGMVLEGWEVKSLREGKVQLTDGYVVIRNGE 60
           MA +K+  +  IA NKKA ++YF E +FEAG+VL GWEVKSLR GK  LTD YV++++GE
Sbjct: 1   MAKQKKHPTGTIAQNKKARHDYFIEHKFEAGLVLSGWEVKSLRAGKAHLTDSYVLLKDGE 60

Query: 61  LFVVGCQINPLKSASTHVNPDSVRTKKLLLKKDEIRRLIGKVEQKGYTLVPLNLHWKAGK 120
            ++ G  I PL +ASTHV  D  RT+KLLL K E+ R+   V QKGYT V L L+W    
Sbjct: 61  AWLFGSHITPLTTASTHVIADPTRTRKLLLNKRELERVEAAVAQKGYTCVALALYWSKHL 120

Query: 121 VKCEIALAKGKAEHDKRDTIKDREGKREVERAMKSRNR 158
           +KCEIAL KGK E DKRDT+++R+  RE++RA++++ +
Sbjct: 121 IKCEIALGKGKKEFDKRDTMRERDSNRELQRAVRNKGK 158