Pairwise Alignments

Query, 546 a.a., 3-methylmercaptopropionyl-CoA ligase (EC 6.2.1.44) of DmdB2 type from Variovorax sp. SCN45

Subject, 540 a.a., AMP-binding domain protein from Pseudomonas putida KT2440

 Score =  232 bits (592), Expect = 2e-65
 Identities = 176/511 (34%), Positives = 262/511 (51%), Gaps = 26/511 (5%)

Query: 39  RTNYSEIQRRSKQVANALRTLGVESGDRVGTLAWNTYRHLALYFGVSGSGAVLHTVNPRL 98
           R N+ E  +R +++A+AL   G+  GD V  +  NT   L  +FGV  +GAVL+T+N RL
Sbjct: 43  RRNWQETYQRCRRLASALAGRGIGRGDTVAVMLPNTPTMLEAHFGVPMTGAVLNTLNVRL 102

Query: 99  FPEQIDYIVNHAEDKVLFFDTTFAPLVEKLAPGLKSVRAFIAMTDRAHMPAIDVPNLLCY 158
             E I +++ H E KVL  D  F  ++E     L+     + + D  +     V  L  Y
Sbjct: 103 DAEAIAFMLQHGEAKVLITDREFHAVIEGALALLEHPPLVVDVDDPEYGEGRAVSQL-DY 161

Query: 159 DELV--GAQSEAYDWPEFDERTASSLCYTSGTTGNPKGVLYSHRSTVLHSLMECAPDTFG 216
           + L+  G    A++WP+ DE  A SL YTSGTTGNPKGV+Y HR   L++L      T+ 
Sbjct: 162 EALLNEGDPEFAWEWPD-DEWQAISLNYTSGTTGNPKGVVYHHRGAYLNALGNQM--TWA 218

Query: 217 VNSQMTLLLAVPMFHANAWGMPYA-AAMTGMKLVMPGPHMDGQSLYELMRDEKVGFSQAV 275
           +  +   L  +PMFH N W  P+   A+ G  + +    +D Q +  L+R+ KV      
Sbjct: 219 MGHRPVYLWTLPMFHCNGWCYPWTITALAGTHVFLR--RVDPQKILTLIREHKVSHLCGA 276

Query: 276 PTIWLMLFQYFDAHPEIDTRAIGLK-RIGVGGAATPRSMIERFERDFGADFVQGWGMTET 334
           P +   L       PE    AI    +  V GAA P  +I   E+  G      +G+TE 
Sbjct: 277 PIVLNALVNM----PEAAKAAIEHPVQAMVAGAAPPAKVIGAVEQ-MGIKVTHTYGLTEV 331

Query: 335 SPIGVIGNLLPKHLSMPKEEQLRVKMRQGRGVWGVELKIVGEDG--QRLPHDGKAFGHLH 392
                +     +  ++  EE+ R+K RQG     ++  +V +    Q +P DG   G + 
Sbjct: 332 YGPVTVCAWHDEWDALSLEERARIKSRQGVRYPTLDGLMVADPQTLQPVPRDGDTLGEIF 391

Query: 393 VRGPWIASGYFKSEGGPVLDAE----GFFPTGDVANIDEDGYVQLVDRAKDVIKSGGEWI 448
           +RG  +  GY K+   P   AE    G+F TGD+A    DGY+++ DR KD+I SGGE I
Sbjct: 392 MRGNTVMKGYLKN---PEATAEAFRGGWFHTGDLAVWHADGYIEIKDRLKDIIISGGENI 448

Query: 449 SSIDLENTASLHPAVAEAAVIGIAHPKWQERPLLIVVKRAGSEVTRE-ELLTFLAERVVK 507
           S+I++E+    H AV EAAV+     KW E P   V  + G E TRE ++ ++  E +  
Sbjct: 449 STIEVEDALYKHSAVLEAAVVARPDEKWGETPCAFVALKPGREDTREADITSWCREHLAG 508

Query: 508 WWLPEDVVFVDSLPHTATGKLLKTKLREQFK 538
           + +P+ VVF   LP T+TGK+ K  LR++ K
Sbjct: 509 FKVPKTVVF-GELPKTSTGKIQKYVLRDRAK 538