Pairwise Alignments

Query, 895 a.a., Regulatory protein, LuxR:Tetratricopeptide TPR_4 from Variovorax sp. SCN45

Subject, 909 a.a., LuxR family transcriptional regulator from Pseudomonas simiae WCS417

 Score =  222 bits (565), Expect = 9e-62
 Identities = 248/936 (26%), Positives = 390/936 (41%), Gaps = 95/936 (10%)

Query: 9   LETKLNPPAATATQVPRTAIREEIAAATV-KLVLVRAPAGFGKTTAMAQIRERMEAQGIA 67
           LE +   P      V R  + E ++A    +L+LV APAGFGK++   +  + + A    
Sbjct: 18  LEGRFYRPPLPDGYVLRPRLCERLSAGLEGRLLLVSAPAGFGKSSLAVEFCQSLPAHW-Q 76

Query: 68  TAWLTLDRADNDVSRFLDCLAEA---------AQRLGVEEPRA-----------NGPFDA 107
           + WL L   DND  RFL+ L +          AQ LG+ + R            +G  D 
Sbjct: 77  SLWLGLSPRDNDPGRFLERLLDGLQQFFPQLGAQSLGLLKMRQRHQPFAFEEWLDGLLDE 136

Query: 108 VAALAAHDAPFTLFLDDFEVVQEPAVLGLVREIVEHLPRRGQLVIGSRGLPDLGLGRLRA 167
           +A   +  AP  L LDD+ + Q P +   ++  + HLP    +++ SR  PD  L RLR 
Sbjct: 137 LAVHLSTRAPLLLVLDDYHLAQGPVLDRCLQFFLNHLPDGLVVLVTSRQRPDWHLARLRL 196

Query: 168 RGQLIEIDTDRLRFSLEETSAFFGLRMAHAKQALQTLPAELLSQLHRKTEGWVAAIWLAS 227
              L+E+    LR + +E+       +A   +   +L  E L  L R++EGWVA +    
Sbjct: 197 SRHLLELHEQDLRLTHDES-------LAVLDRHSNSLQGEALDNLIRRSEGWVAGLRFWL 249

Query: 228 MALERHGTETGFVERFSGSDRAVADYLAEDVLAHQPPDIRDFLLRTSILRQLDASVCQAL 287
           +A    G +    +   G +  + DYL E+V+   P D++ FL  T+   +  + +C A+
Sbjct: 250 LAASEAGGDGALPQSLHGGEGLIRDYLLEEVIDCLPADVQAFLYDTAPQDRFCSELCDAV 309

Query: 288 CPRADCAAILERLAASNLFLTPVSGDGADSAWRYHSLFADFLRARLAHEQPGETARLHLS 347
               D A IL  L A  +FL P+   G    +RYH LF+D LR R A       A LHL 
Sbjct: 310 REAHDSAEILRYLQAHQVFLVPLDDQG--HWYRYHHLFSDLLRTRRASSHVLPAASLHLR 367

Query: 348 AAGWYESHDRPVPAIDHAIEGGDHPYALALLDSYA-AQFLEQGRMRMLARWFSAIPEHQL 406
           A  W+ +      A++ A+  G    A  L+ + +  Q L +  + ML RW   +P+  L
Sbjct: 368 ACRWFNAQGLIDEAVEQALRAGHLDVAANLVQNLSEEQLLAEQNVGMLLRWKMDLPDSLL 427

Query: 407 REHPFLQPIALWA---TCFTHGPWEAMRMLEQSGCLDSPIAEVRASAHTLVPLLLAMQDR 463
              P L  +  WA    C      E    L +     S  A+    A  L    +  + R
Sbjct: 428 ISTPRLIVLYSWALGLACQLDAAEELSSYLSRFLPAPSATAQKSMLAQWLALSGIIARGR 487

Query: 464 HDE--AYEIGRQSLARLPTGLPFADSVLLNAMAHILAVRGDQHEARRM----LEAARERG 517
            D         ++L  LP        + L+ ++++  V  D   AR +    LE A+  G
Sbjct: 488 GDRELTQRYCSEALESLPQRRYGQRLMCLSTLSNLAIVDADLWRARGLNRESLELAQRVG 547

Query: 518 SSTFNRMYTESLAGLFDLHEGRLRQATARLRMAVDSTHAVSYNHSHGNAWAGVLYAGAVY 577
           +  F  +     A +     G + ++   +R  +   H ++    +       LY G + 
Sbjct: 548 NPLFEALAHYDRARVLQA-RGEILRSLDEVRQGLQRLHGLAPQRLYAVRARLSLYEGFLL 606

Query: 578 ETNQLVQAEHLLNVYLPLARDVGLPD-HMILSHVMRSRLAFHAGDIDAAFQALTELEYLG 636
              +L     L  +   LA      D  +++ H + +      GD   AF  L E E L 
Sbjct: 607 LV-RLQPDAGLARLRAGLAEARACRDISVLIGHCVIANFEGRRGDFPKAFAELAEAERLM 665

Query: 637 HHRQLPRV--VAGAKLERSRMLLLQGNGPASRDELARA-----DDPALWDREKRQRLPAH 689
           H   +P +  +A   L +  + L QG    +   L R       + A    E    LP H
Sbjct: 666 HIWDVPPIYYLAMITLIKCELWLAQGRTDLADAWLTRLGQTYHGEHAAAAPEFHPHLPQH 725

Query: 690 DLDYMALARARWDIAFGDARAALDVLDAELHTALASAHNRRALKLRVLRALALQAAGDTA 749
                           G  +AALD           +  ++ A  L+ L  LALQA     
Sbjct: 726 ---------------IGLQQAALD-----------ATRHQPAAALQRLEELALQAHNSGR 759

Query: 750 AAVREIETVLQAASQEGFVRLILDEGP-----AVGTLVHRYALSAQDAPAARGDPILADY 804
             +      L A +Q   V+L+L+EG      +V T      +     P  R      D+
Sbjct: 760 QMI-----ALMALTQR--VQLLLEEGQETKARSVFTQALEAGIGGALQPFQRLLETHPDW 812

Query: 805 LQRLLQ------LAGPMPAAEPESPATGADAMKEPLTRKEIRVLQLLAEGYSNSAMAEKL 858
           ++  L       L+  + A  P      A +  E L+ +E+ VLQL+A+G SN  ++ +L
Sbjct: 813 MREQLAKDPHGLLSQSLLALLPAVVVVEAASTHETLSARELAVLQLIAQGCSNQEISNRL 872

Query: 859 FVSDSTVRTHLRNINMKLDAKSRTQAVAIARRLGVI 894
           F+S  TV+TH  +IN KL  + RTQAVA A+ L +I
Sbjct: 873 FISLHTVKTHASHINSKLGVERRTQAVARAQELRLI 908